Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RIPK4P57078 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC20■□□□□ 0.79
RIPK4P57078 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC20■□□□□ 0.79
RIPK4P57078 OVCH1-AS1-204ENST00000641955 5529 ntBASIC20■□□□□ 0.79
RIPK4P57078 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RIPK4P57078 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RIPK4P57078 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 MIR658-201ENST00000385210 100 ntBASIC20■□□□□ 0.79
RIPK4P57078 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RIPK4P57078 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
RIPK4P57078 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 AC022616.1-201ENST00000518688 554 ntBASIC20■□□□□ 0.79
RIPK4P57078 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC20■□□□□ 0.79
RIPK4P57078 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20■□□□□ 0.79
RIPK4P57078 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20■□□□□ 0.79
RIPK4P57078 DUX4L47-201ENST00000566374 394 ntBASIC20■□□□□ 0.79
RIPK4P57078 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20■□□□□ 0.79
RIPK4P57078 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20■□□□□ 0.79
RIPK4P57078 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 AL137783.1-201ENST00000623494 1896 ntBASIC20■□□□□ 0.79
RIPK4P57078 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20■□□□□ 0.79
RIPK4P57078 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC20■□□□□ 0.79
RIPK4P57078 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC20■□□□□ 0.79
RIPK4P57078 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK4P57078 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.99■□□□□ 0.79
RIPK4P57078 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.99■□□□□ 0.79
RIPK4P57078 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.99■□□□□ 0.79
RIPK4P57078 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.99■□□□□ 0.79
RIPK4P57078 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RIPK4P57078 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 C2orf27AP3-201ENST00000434123 579 ntBASIC19.99■□□□□ 0.79
RIPK4P57078 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.99■□□□□ 0.79
RIPK4P57078 RPL7P3-201ENST00000441388 714 ntBASIC19.99■□□□□ 0.79
RIPK4P57078 KLF2P4-201ENST00000451959 1225 ntBASIC19.99■□□□□ 0.79
RIPK4P57078 AC104989.1-201ENST00000519711 778 ntBASIC19.99■□□□□ 0.79
RIPK4P57078 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.99■□□□□ 0.79
RIPK4P57078 AP000812.2-201ENST00000538934 718 ntBASIC19.99■□□□□ 0.79
RIPK4P57078 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.99■□□□□ 0.79
RIPK4P57078 KRT90P-201ENST00000549264 1064 ntBASIC19.99■□□□□ 0.79
RIPK4P57078 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.99■□□□□ 0.79
RIPK4P57078 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RIPK4P57078 AL008721.1-201ENST00000609964 604 ntBASIC19.99■□□□□ 0.79
RIPK4P57078 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.99■□□□□ 0.79
RIPK4P57078 AL354718.3-201ENST00000616414 581 ntBASIC19.99■□□□□ 0.79
RIPK4P57078 AC132938.4-201ENST00000623835 848 ntBASIC19.99■□□□□ 0.79
RIPK4P57078 CR382287.1-201ENST00000623954 586 ntBASIC19.99■□□□□ 0.79
RIPK4P57078 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.99■□□□□ 0.79
RIPK4P57078 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC19.99■□□□□ 0.79
RIPK4P57078 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC19.99■□□□□ 0.79
RIPK4P57078 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RIPK4P57078 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.99■□□□□ 0.79
RIPK4P57078 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.99■□□□□ 0.79
RIPK4P57078 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK4P57078 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 WASH3P-207ENST00000560956 1394 ntBASIC19.98■□□□□ 0.79
RIPK4P57078 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RIPK4P57078 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK4P57078 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms