Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ4P56696 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ4P56696 AL360270.3-201ENST00000609118 1348 ntBASIC19.23■□□□□ 0.67
KCNQ4P56696 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
KCNQ4P56696 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ4P56696 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
KCNQ4P56696 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ4P56696 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNQ4P56696 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNQ4P56696 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNQ4P56696 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
KCNQ4P56696 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 FAM90A2P-201ENST00000511144 1395 ntBASIC19.22■□□□□ 0.67
KCNQ4P56696 FAM90A25P-201ENST00000528404 1395 ntBASIC19.22■□□□□ 0.67
KCNQ4P56696 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 SOD2-202ENST00000367054 815 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNQ4P56696 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.22■□□□□ 0.67
KCNQ4P56696 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
KCNQ4P56696 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC19.22■□□□□ 0.67
KCNQ4P56696 AL645728.2-202ENST00000641679 227 ntBASIC19.22■□□□□ 0.67
KCNQ4P56696 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 HYMAI-201ENST00000635591 3347 ntBASIC19.22■□□□□ 0.67
KCNQ4P56696 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KCNQ4P56696 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.22■□□□□ 0.67
KCNQ4P56696 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNQ4P56696 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNQ4P56696 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KCNQ4P56696 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KCNQ4P56696 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNQ4P56696 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
KCNQ4P56696 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNQ4P56696 AC112504.1-201ENST00000623415 1841 ntBASIC19.21■□□□□ 0.67
KCNQ4P56696 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNQ4P56696 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNQ4P56696 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC19.21■□□□□ 0.67
KCNQ4P56696 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC19.21■□□□□ 0.67
KCNQ4P56696 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC19.21■□□□□ 0.67
KCNQ4P56696 RN7SL258P-201ENST00000478664 300 ntBASIC19.21■□□□□ 0.67
KCNQ4P56696 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNQ4P56696 AC010234.1-201ENST00000494599 870 ntBASIC19.21■□□□□ 0.67
KCNQ4P56696 AC008723.1-201ENST00000506922 207 ntBASIC19.21■□□□□ 0.67
KCNQ4P56696 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.21■□□□□ 0.67
KCNQ4P56696 MIR4522-201ENST00000584932 87 ntBASIC19.21■□□□□ 0.67
KCNQ4P56696 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
KCNQ4P56696 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNQ4P56696 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC19.21■□□□□ 0.67
KCNQ4P56696 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNQ4P56696 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNQ4P56696 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNQ4P56696 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNQ4P56696 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNQ4P56696 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
KCNQ4P56696 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNQ4P56696 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
KCNQ4P56696 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KCNQ4P56696 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.66
KCNQ4P56696 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ4P56696 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ4P56696 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNQ4P56696 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
KCNQ4P56696 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ4P56696 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ4P56696 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ4P56696 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNQ4P56696 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
KCNQ4P56696 AC010491.1-201ENST00000563101 2797 ntBASIC19.2■□□□□ 0.66
KCNQ4P56696 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNQ4P56696 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KCNQ4P56696 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms