Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CMC4P56277 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC11.41□□□□□ -0.58
CMC4P56277 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CMC4P56277 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
CMC4P56277 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
CMC4P56277 BOLA2P3-201ENST00000404566 256 ntBASIC11.41□□□□□ -0.58
CMC4P56277 AL139094.1-201ENST00000405549 1188 ntBASIC11.41□□□□□ -0.58
CMC4P56277 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 AC022137.2-201ENST00000503482 481 ntBASIC11.41□□□□□ -0.58
CMC4P56277 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 AC010319.3-201ENST00000597028 470 ntBASIC11.41□□□□□ -0.58
CMC4P56277 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.41□□□□□ -0.58
CMC4P56277 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.41□□□□□ -0.58
CMC4P56277 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.41□□□□□ -0.58
CMC4P56277 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.41□□□□□ -0.58
CMC4P56277 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 AC092850.2-201ENST00000623821 2697 ntBASIC11.41□□□□□ -0.58
CMC4P56277 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CMC4P56277 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
CMC4P56277 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CMC4P56277 AC134312.5-201ENST00000568031 1313 ntBASIC11.4□□□□□ -0.58
CMC4P56277 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CMC4P56277 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CMC4P56277 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.4□□□□□ -0.58
CMC4P56277 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
CMC4P56277 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CMC4P56277 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.4□□□□□ -0.58
CMC4P56277 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.4□□□□□ -0.58
CMC4P56277 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
CMC4P56277 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CMC4P56277 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CMC4P56277 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CMC4P56277 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.4□□□□□ -0.58
CMC4P56277 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.4□□□□□ -0.58
CMC4P56277 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
CMC4P56277 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CMC4P56277 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CMC4P56277 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.4□□□□□ -0.58
CMC4P56277 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
CMC4P56277 C2orf27AP3-201ENST00000434123 579 ntBASIC11.4□□□□□ -0.58
CMC4P56277 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CMC4P56277 TTTY23B-201ENST00000442790 549 ntBASIC11.4□□□□□ -0.58
CMC4P56277 GAPDHP21-201ENST00000450301 1010 ntBASIC11.4□□□□□ -0.58
CMC4P56277 AC093433.1-201ENST00000458048 571 ntBASIC11.4□□□□□ -0.58
CMC4P56277 GIMAP3P-201ENST00000495150 836 ntBASIC11.4□□□□□ -0.58
CMC4P56277 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.4□□□□□ -0.58
CMC4P56277 AP005018.1-201ENST00000525475 301 ntBASIC11.4□□□□□ -0.58
CMC4P56277 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CMC4P56277 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.4□□□□□ -0.58
CMC4P56277 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CMC4P56277 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.4□□□□□ -0.58
CMC4P56277 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.4□□□□□ -0.58
CMC4P56277 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.4□□□□□ -0.58
CMC4P56277 AC012645.4-201ENST00000610691 1061 ntBASIC11.4□□□□□ -0.58
CMC4P56277 AL354718.3-201ENST00000616414 581 ntBASIC11.4□□□□□ -0.58
CMC4P56277 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC11.4□□□□□ -0.58
CMC4P56277 AC132938.4-201ENST00000623835 848 ntBASIC11.4□□□□□ -0.58
CMC4P56277 CR382287.1-201ENST00000623954 586 ntBASIC11.4□□□□□ -0.58
CMC4P56277 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC11.4□□□□□ -0.58
CMC4P56277 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
CMC4P56277 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
CMC4P56277 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CMC4P56277 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CMC4P56277 MROH4P-201ENST00000431302 1578 ntBASIC11.4□□□□□ -0.58
CMC4P56277 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms