Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
BRCA2P51587 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.67■□□□□ 0.26
BRCA2P51587 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
BRCA2P51587 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRCA2P51587 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRCA2P51587 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.67■□□□□ 0.26
BRCA2P51587 TSPY25P-201ENST00000429463 745 ntBASIC16.67■□□□□ 0.26
BRCA2P51587 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRCA2P51587 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRCA2P51587 DUT-207ENST00000559416 635 ntTSL 2 BASIC16.67■□□□□ 0.26
BRCA2P51587 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.67■□□□□ 0.26
BRCA2P51587 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRCA2P51587 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRCA2P51587 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRCA2P51587 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRCA2P51587 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.67■□□□□ 0.26
BRCA2P51587 KRT18P9-201ENST00000604826 1300 ntBASIC16.67■□□□□ 0.26
BRCA2P51587 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.67■□□□□ 0.26
BRCA2P51587 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRCA2P51587 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRCA2P51587 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRCA2P51587 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRCA2P51587 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.67■□□□□ 0.26
BRCA2P51587 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.67■□□□□ 0.26
BRCA2P51587 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRCA2P51587 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.67■□□□□ 0.26
BRCA2P51587 HMGB1P24-201ENST00000611897 328 ntBASIC16.67■□□□□ 0.26
BRCA2P51587 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
BRCA2P51587 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
BRCA2P51587 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
BRCA2P51587 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.66■□□□□ 0.26
BRCA2P51587 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.66■□□□□ 0.26
BRCA2P51587 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC16.66■□□□□ 0.26
BRCA2P51587 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.66■□□□□ 0.26
BRCA2P51587 AC006122.1-201ENST00000493323 440 ntBASIC16.66■□□□□ 0.26
BRCA2P51587 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.66■□□□□ 0.26
BRCA2P51587 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.66■□□□□ 0.26
BRCA2P51587 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
BRCA2P51587 AC023090.2-201ENST00000625182 2110 ntBASIC16.66■□□□□ 0.26
BRCA2P51587 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.66■□□□□ 0.26
BRCA2P51587 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.66■□□□□ 0.26
BRCA2P51587 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 AC099398.1-201ENST00000567919 2776 ntBASIC16.66■□□□□ 0.26
BRCA2P51587 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.66■□□□□ 0.26
BRCA2P51587 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.66■□□□□ 0.26
BRCA2P51587 AL512306.1-201ENST00000432698 848 ntBASIC16.66■□□□□ 0.26
BRCA2P51587 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 HNRNPA1P42-201ENST00000458678 957 ntBASIC16.66■□□□□ 0.26
BRCA2P51587 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.66■□□□□ 0.26
BRCA2P51587 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.66■□□□□ 0.26
BRCA2P51587 AC093752.3-201ENST00000567343 901 ntBASIC16.66■□□□□ 0.26
BRCA2P51587 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC16.66■□□□□ 0.26
BRCA2P51587 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.66■□□□□ 0.26
BRCA2P51587 AP001184.1-201ENST00000637936 376 ntBASIC16.66■□□□□ 0.26
BRCA2P51587 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
BRCA2P51587 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
BRCA2P51587 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.66■□□□□ 0.26
BRCA2P51587 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.66■□□□□ 0.26
BRCA2P51587 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.66■□□□□ 0.26
BRCA2P51587 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC16.66■□□□□ 0.26
BRCA2P51587 SIGLEC18P-201ENST00000602271 909 ntBASIC16.66■□□□□ 0.26
BRCA2P51587 AC090510.3-201ENST00000615831 821 ntBASIC16.66■□□□□ 0.26
BRCA2P51587 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRCA2P51587 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 AC025183.3-201ENST00000623526 1482 ntBASIC16.65■□□□□ 0.26
BRCA2P51587 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 HLA-K-203ENST00000430151 1046 ntBASIC16.65■□□□□ 0.26
BRCA2P51587 LINC01783-202ENST00000614408 828 ntBASIC16.65■□□□□ 0.26
BRCA2P51587 BX284668.2-205ENST00000619677 828 ntBASIC16.65■□□□□ 0.26
BRCA2P51587 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCA2P51587 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.65■□□□□ 0.26
BRCA2P51587 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms