Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
CDC34P49427 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.2□□□□□ -0.46
CDC34P49427 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CDC34P49427 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CDC34P49427 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CDC34P49427 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CDC34P49427 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CDC34P49427 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 AP001267.2-201ENST00000532619 2086 ntBASIC12.19□□□□□ -0.46
CDC34P49427 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.19□□□□□ -0.46
CDC34P49427 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.19□□□□□ -0.46
CDC34P49427 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.19□□□□□ -0.46
CDC34P49427 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.19□□□□□ -0.46
CDC34P49427 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.19□□□□□ -0.46
CDC34P49427 AC098859.1-201ENST00000502915 1238 ntBASIC12.19□□□□□ -0.46
CDC34P49427 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.19□□□□□ -0.46
CDC34P49427 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.19□□□□□ -0.46
CDC34P49427 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.19□□□□□ -0.46
CDC34P49427 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CDC34P49427 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CDC34P49427 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CDC34P49427 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CDC34P49427 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.19□□□□□ -0.46
CDC34P49427 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.19□□□□□ -0.46
CDC34P49427 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.19□□□□□ -0.46
CDC34P49427 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC34P49427 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.19□□□□□ -0.46
CDC34P49427 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
CDC34P49427 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.18□□□□□ -0.46
CDC34P49427 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CDC34P49427 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CDC34P49427 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.18□□□□□ -0.46
CDC34P49427 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.18□□□□□ -0.46
CDC34P49427 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.18□□□□□ -0.46
CDC34P49427 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CDC34P49427 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.18□□□□□ -0.46
CDC34P49427 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CDC34P49427 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.18□□□□□ -0.46
CDC34P49427 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.18□□□□□ -0.46
CDC34P49427 GHSR-202ENST00000427970 912 ntBASIC12.18□□□□□ -0.46
CDC34P49427 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CDC34P49427 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.18□□□□□ -0.46
CDC34P49427 HNRNPUP1-201ENST00000554987 333 ntBASIC12.18□□□□□ -0.46
CDC34P49427 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.18□□□□□ -0.46
CDC34P49427 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.18□□□□□ -0.46
CDC34P49427 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.18□□□□□ -0.46
CDC34P49427 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.18□□□□□ -0.46
CDC34P49427 CLEC4GP1-201ENST00000596555 870 ntBASIC12.18□□□□□ -0.46
CDC34P49427 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.18□□□□□ -0.46
CDC34P49427 AP002414.3-201ENST00000589352 1468 ntBASIC12.18□□□□□ -0.46
CDC34P49427 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CDC34P49427 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms