Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.62■□□□□ 0.57
RFX5P48382 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX5P48382 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RFX5P48382 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RFX5P48382 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RFX5P48382 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.61■□□□□ 0.57
RFX5P48382 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RFX5P48382 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX5P48382 KRT8P4-201ENST00000509735 1454 ntBASIC18.61■□□□□ 0.57
RFX5P48382 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.61■□□□□ 0.57
RFX5P48382 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 AL591846.1-201ENST00000451736 433 ntBASIC18.61■□□□□ 0.57
RFX5P48382 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 ZNF767P-206ENST00000513792 565 ntBASIC18.61■□□□□ 0.57
RFX5P48382 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.61■□□□□ 0.57
RFX5P48382 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.61■□□□□ 0.57
RFX5P48382 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX5P48382 MIR4783-201ENST00000580343 82 ntBASIC18.61■□□□□ 0.57
RFX5P48382 ZACNP1-201ENST00000612259 710 ntBASIC18.61■□□□□ 0.57
RFX5P48382 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RFX5P48382 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RFX5P48382 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX5P48382 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX5P48382 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.61■□□□□ 0.57
RFX5P48382 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX5P48382 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RFX5P48382 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RFX5P48382 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RFX5P48382 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.6■□□□□ 0.57
RFX5P48382 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.6■□□□□ 0.57
RFX5P48382 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.6■□□□□ 0.57
RFX5P48382 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.6■□□□□ 0.57
RFX5P48382 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.6■□□□□ 0.57
RFX5P48382 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.6■□□□□ 0.57
RFX5P48382 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.6■□□□□ 0.57
RFX5P48382 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RFX5P48382 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.6■□□□□ 0.57
RFX5P48382 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.6■□□□□ 0.57
RFX5P48382 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.6■□□□□ 0.57
RFX5P48382 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.6■□□□□ 0.57
RFX5P48382 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RFX5P48382 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 AC046158.3-201ENST00000624947 2558 ntBASIC18.6■□□□□ 0.57
RFX5P48382 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX5P48382 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.59■□□□□ 0.57
RFX5P48382 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX5P48382 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX5P48382 AC015818.8-201ENST00000587907 1519 ntBASIC18.59■□□□□ 0.57
RFX5P48382 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.59■□□□□ 0.57
RFX5P48382 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX5P48382 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX5P48382 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX5P48382 TCAF2P1-201ENST00000291129 2421 ntBASIC18.59■□□□□ 0.57
RFX5P48382 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX5P48382 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RFX5P48382 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFX5P48382 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX5P48382 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX5P48382 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX5P48382 AL136309.1-201ENST00000403917 691 ntBASIC18.59■□□□□ 0.57
RFX5P48382 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.59■□□□□ 0.57
RFX5P48382 HSPB1P2-201ENST00000448722 546 ntBASIC18.59■□□□□ 0.57
RFX5P48382 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX5P48382 AC100850.1-201ENST00000506768 649 ntBASIC18.59■□□□□ 0.57
RFX5P48382 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFX5P48382 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms