Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
BRCC3P46736 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.23■□□□□ 0.19
BRCC3P46736 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.23■□□□□ 0.19
BRCC3P46736 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
BRCC3P46736 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BRCC3P46736 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.23■□□□□ 0.19
BRCC3P46736 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
BRCC3P46736 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.22■□□□□ 0.19
BRCC3P46736 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.22■□□□□ 0.19
BRCC3P46736 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.22■□□□□ 0.19
BRCC3P46736 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
BRCC3P46736 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
BRCC3P46736 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
BRCC3P46736 BTBD6P1-201ENST00000412176 1267 ntBASIC16.22■□□□□ 0.19
BRCC3P46736 MTX1P1-201ENST00000440904 838 ntBASIC16.22■□□□□ 0.19
BRCC3P46736 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 RPSAP36-202ENST00000494591 1261 ntBASIC16.22■□□□□ 0.19
BRCC3P46736 COX5BP1-201ENST00000507622 393 ntBASIC16.22■□□□□ 0.19
BRCC3P46736 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
BRCC3P46736 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.22■□□□□ 0.19
BRCC3P46736 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.22■□□□□ 0.19
BRCC3P46736 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
BRCC3P46736 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
BRCC3P46736 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.22■□□□□ 0.19
BRCC3P46736 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.22■□□□□ 0.19
BRCC3P46736 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.22■□□□□ 0.19
BRCC3P46736 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.22■□□□□ 0.19
BRCC3P46736 EEF1DP1-201ENST00000585891 896 ntBASIC16.22■□□□□ 0.19
BRCC3P46736 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.22■□□□□ 0.19
BRCC3P46736 AC244093.1-201ENST00000610837 814 ntBASIC16.22■□□□□ 0.19
BRCC3P46736 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 C18orf15-201ENST00000623680 2534 ntBASIC16.22■□□□□ 0.19
BRCC3P46736 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.22■□□□□ 0.19
BRCC3P46736 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.22■□□□□ 0.19
BRCC3P46736 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 AC112693.3-201ENST00000624819 1983 ntBASIC16.22■□□□□ 0.19
BRCC3P46736 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
BRCC3P46736 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BRCC3P46736 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.22■□□□□ 0.19
BRCC3P46736 CLUHP2-201ENST00000426660 1303 ntBASIC16.21■□□□□ 0.19
BRCC3P46736 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.21■□□□□ 0.19
BRCC3P46736 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.21■□□□□ 0.19
BRCC3P46736 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.21■□□□□ 0.19
BRCC3P46736 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
BRCC3P46736 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 AL137783.1-201ENST00000623494 1896 ntBASIC16.21■□□□□ 0.19
BRCC3P46736 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
BRCC3P46736 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 AL591846.1-201ENST00000451736 433 ntBASIC16.21■□□□□ 0.19
BRCC3P46736 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.21■□□□□ 0.19
BRCC3P46736 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.21■□□□□ 0.19
BRCC3P46736 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
BRCC3P46736 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.21■□□□□ 0.19
BRCC3P46736 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.21■□□□□ 0.19
BRCC3P46736 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.21■□□□□ 0.19
BRCC3P46736 AC005695.3-201ENST00000614522 232 ntBASIC16.21■□□□□ 0.19
BRCC3P46736 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.21■□□□□ 0.19
BRCC3P46736 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.21■□□□□ 0.19
BRCC3P46736 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 AC020907.1-201ENST00000616460 1350 ntBASIC16.21■□□□□ 0.19
BRCC3P46736 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
BRCC3P46736 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms