Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.63□□□□□ -0.39
NKX2-1P43699 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.63□□□□□ -0.39
NKX2-1P43699 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.63□□□□□ -0.39
NKX2-1P43699 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.63□□□□□ -0.39
NKX2-1P43699 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.63□□□□□ -0.39
NKX2-1P43699 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.63□□□□□ -0.39
NKX2-1P43699 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX2-1P43699 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
NKX2-1P43699 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX2-1P43699 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
NKX2-1P43699 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
NKX2-1P43699 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX2-1P43699 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 AL607033.1-201ENST00000623900 1599 ntBASIC12.62□□□□□ -0.39
NKX2-1P43699 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
NKX2-1P43699 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 TPM4P1-201ENST00000436100 807 ntBASIC12.62□□□□□ -0.39
NKX2-1P43699 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX2-1P43699 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.62□□□□□ -0.39
NKX2-1P43699 UNC93B6-202ENST00000528242 690 ntBASIC12.62□□□□□ -0.39
NKX2-1P43699 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.62□□□□□ -0.39
NKX2-1P43699 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.62□□□□□ -0.39
NKX2-1P43699 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX2-1P43699 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX2-1P43699 AL773604.1-201ENST00000617417 272 ntBASIC12.62□□□□□ -0.39
NKX2-1P43699 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX2-1P43699 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX2-1P43699 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX2-1P43699 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NKX2-1P43699 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX2-1P43699 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.62□□□□□ -0.39
NKX2-1P43699 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NKX2-1P43699 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.62□□□□□ -0.39
NKX2-1P43699 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 AC152010.1-201ENST00000415779 2006 ntBASIC12.61□□□□□ -0.39
NKX2-1P43699 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NKX2-1P43699 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NKX2-1P43699 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms