Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
GDNFP39905 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.43□□□□□ -0.26
GDNFP39905 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.43□□□□□ -0.26
GDNFP39905 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.43□□□□□ -0.26
GDNFP39905 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.43□□□□□ -0.26
GDNFP39905 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.43□□□□□ -0.26
GDNFP39905 TIMM8BP1-201ENST00000452384 211 ntBASIC13.43□□□□□ -0.26
GDNFP39905 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.43□□□□□ -0.26
GDNFP39905 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.43□□□□□ -0.26
GDNFP39905 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 BNIP3P1-202ENST00000550043 1585 ntBASIC13.43□□□□□ -0.26
GDNFP39905 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.43□□□□□ -0.26
GDNFP39905 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.43□□□□□ -0.26
GDNFP39905 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 AC027307.2-201ENST00000591252 911 ntBASIC13.43□□□□□ -0.26
GDNFP39905 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
GDNFP39905 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
GDNFP39905 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
GDNFP39905 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 AL359183.1-201ENST00000623796 2132 ntBASIC13.43□□□□□ -0.26
GDNFP39905 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
GDNFP39905 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 CICP17-201ENST00000418553 2377 ntBASIC13.43□□□□□ -0.26
GDNFP39905 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.43□□□□□ -0.26
GDNFP39905 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GDNFP39905 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 AL359881.3-201ENST00000602640 1721 ntBASIC13.42□□□□□ -0.26
GDNFP39905 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.42□□□□□ -0.26
GDNFP39905 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
GDNFP39905 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 BX842568.4-201ENST00000421222 227 ntBASIC13.42□□□□□ -0.26
GDNFP39905 SPCS2P4-201ENST00000436160 681 ntBASIC13.42□□□□□ -0.26
GDNFP39905 MKNK2P1-201ENST00000437526 628 ntBASIC13.42□□□□□ -0.26
GDNFP39905 SPDYE11-202ENST00000450699 704 ntBASIC13.42□□□□□ -0.26
GDNFP39905 CEND1P1-201ENST00000451006 455 ntBASIC13.42□□□□□ -0.26
GDNFP39905 AC112482.1-201ENST00000492080 688 ntBASIC13.42□□□□□ -0.26
GDNFP39905 AC079140.1-201ENST00000508039 487 ntBASIC13.42□□□□□ -0.26
GDNFP39905 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.42□□□□□ -0.26
GDNFP39905 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.42□□□□□ -0.26
GDNFP39905 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.42□□□□□ -0.26
GDNFP39905 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.42□□□□□ -0.26
GDNFP39905 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.42□□□□□ -0.26
GDNFP39905 SPDYE9P-201ENST00000570642 692 ntBASIC13.42□□□□□ -0.26
GDNFP39905 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
GDNFP39905 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 AC026120.1-201ENST00000611536 926 ntBASIC13.42□□□□□ -0.26
GDNFP39905 SPDYE10P-202ENST00000612005 668 ntBASIC13.42□□□□□ -0.26
GDNFP39905 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
GDNFP39905 SPDYE8P-202ENST00000612377 668 ntBASIC13.42□□□□□ -0.26
GDNFP39905 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GDNFP39905 REXO1L2P-201ENST00000425429 2069 ntBASIC13.42□□□□□ -0.26
GDNFP39905 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.42□□□□□ -0.26
GDNFP39905 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.42□□□□□ -0.26
GDNFP39905 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
GDNFP39905 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms