Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN1P35523 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CLCN1P35523 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN1P35523 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN1P35523 AC073439.1-201ENST00000624121 1774 ntBASIC17.53■□□□□ 0.4
CLCN1P35523 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN1P35523 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.53■□□□□ 0.4
CLCN1P35523 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC17.53■□□□□ 0.4
CLCN1P35523 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLCN1P35523 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN1P35523 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN1P35523 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN1P35523 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN1P35523 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 AC004241.5-201ENST00000623870 2448 ntBASIC17.52■□□□□ 0.4
CLCN1P35523 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CLCN1P35523 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 U82695.1-201ENST00000635752 1889 ntBASIC17.52■□□□□ 0.4
CLCN1P35523 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CLCN1P35523 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CLCN1P35523 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 AC131902.2-201ENST00000566892 2172 ntBASIC17.52■□□□□ 0.4
CLCN1P35523 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CLCN1P35523 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CLCN1P35523 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.52■□□□□ 0.4
CLCN1P35523 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.52■□□□□ 0.4
CLCN1P35523 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN1P35523 WASH6P-202ENST00000359512 1437 ntBASIC17.52■□□□□ 0.4
CLCN1P35523 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN1P35523 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN1P35523 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN1P35523 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN1P35523 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.52■□□□□ 0.39
CLCN1P35523 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN1P35523 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CLCN1P35523 AC114271.1-201ENST00000612689 2813 ntBASIC17.52■□□□□ 0.39
CLCN1P35523 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN1P35523 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN1P35523 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN1P35523 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CLCN1P35523 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCN1P35523 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.51■□□□□ 0.39
CLCN1P35523 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.51■□□□□ 0.39
CLCN1P35523 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CLCN1P35523 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCN1P35523 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CLCN1P35523 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CLCN1P35523 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCN1P35523 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 AC002056.1-201ENST00000395613 760 ntBASIC17.51■□□□□ 0.39
CLCN1P35523 SSR1P1-201ENST00000407630 814 ntBASIC17.51■□□□□ 0.39
CLCN1P35523 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCN1P35523 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CLCN1P35523 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.51■□□□□ 0.39
CLCN1P35523 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 PGAM5P1-201ENST00000518923 814 ntBASIC17.51■□□□□ 0.39
CLCN1P35523 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 AL671883.3-201ENST00000603274 991 ntBASIC17.51■□□□□ 0.39
CLCN1P35523 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLCN1P35523 AL161645.1-201ENST00000622716 1255 ntBASIC17.51■□□□□ 0.39
CLCN1P35523 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
CLCN1P35523 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CLCN1P35523 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CLCN1P35523 AC023090.2-201ENST00000625182 2110 ntBASIC17.51■□□□□ 0.39
CLCN1P35523 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLCN1P35523 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN1P35523 SLC9A3P3-201ENST00000457608 2229 ntBASIC17.51■□□□□ 0.39
CLCN1P35523 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms