Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RORAP35398 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RORAP35398 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.59□□□□□ -0.07
RORAP35398 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
RORAP35398 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.59□□□□□ -0.07
RORAP35398 CNN2P8-201ENST00000421872 913 ntBASIC14.59□□□□□ -0.07
RORAP35398 C2orf27AP3-201ENST00000434123 579 ntBASIC14.59□□□□□ -0.07
RORAP35398 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.59□□□□□ -0.07
RORAP35398 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.59□□□□□ -0.07
RORAP35398 KRT18P25-201ENST00000508931 1278 ntBASIC14.59□□□□□ -0.07
RORAP35398 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.59□□□□□ -0.07
RORAP35398 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RORAP35398 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.59□□□□□ -0.07
RORAP35398 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RORAP35398 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.59□□□□□ -0.07
RORAP35398 AL354718.3-201ENST00000616414 581 ntBASIC14.59□□□□□ -0.07
RORAP35398 CR382287.1-201ENST00000623954 586 ntBASIC14.59□□□□□ -0.07
RORAP35398 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RORAP35398 C8orf49-201ENST00000525043 1968 ntBASIC14.59□□□□□ -0.07
RORAP35398 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RORAP35398 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RORAP35398 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RORAP35398 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.59□□□□□ -0.07
RORAP35398 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RORAP35398 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RORAP35398 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RORAP35398 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.59□□□□□ -0.07
RORAP35398 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.59□□□□□ -0.07
RORAP35398 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.59□□□□□ -0.07
RORAP35398 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.59□□□□□ -0.07
RORAP35398 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RORAP35398 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RORAP35398 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RORAP35398 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RORAP35398 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RORAP35398 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RORAP35398 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.58□□□□□ -0.07
RORAP35398 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RORAP35398 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RORAP35398 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RORAP35398 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RORAP35398 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.58□□□□□ -0.08
RORAP35398 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RORAP35398 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RORAP35398 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.58□□□□□ -0.08
RORAP35398 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.58□□□□□ -0.08
RORAP35398 AC079316.1-201ENST00000548397 411 ntBASIC14.58□□□□□ -0.08
RORAP35398 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.58□□□□□ -0.08
RORAP35398 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.58□□□□□ -0.08
RORAP35398 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.58□□□□□ -0.08
RORAP35398 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.58□□□□□ -0.08
RORAP35398 RHOXF1P1-202ENST00000635473 501 ntBASIC14.58□□□□□ -0.08
RORAP35398 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 TUBB1P2-201ENST00000422712 1306 ntBASIC14.58□□□□□ -0.08
RORAP35398 TUBB1P1-201ENST00000503144 1300 ntBASIC14.58□□□□□ -0.08
RORAP35398 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RORAP35398 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.58□□□□□ -0.08
RORAP35398 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
RORAP35398 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.58□□□□□ -0.08
RORAP35398 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.58□□□□□ -0.08
RORAP35398 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.58□□□□□ -0.08
RORAP35398 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RORAP35398 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.57□□□□□ -0.08
RORAP35398 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.57□□□□□ -0.08
RORAP35398 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 AC084364.1-201ENST00000551967 1556 ntBASIC14.57□□□□□ -0.08
RORAP35398 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RORAP35398 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
RORAP35398 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RORAP35398 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
RORAP35398 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.57□□□□□ -0.08
RORAP35398 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms