Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RFC4P35249 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFC4P35249 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.02■□□□□ 0.64
RFC4P35249 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RFC4P35249 AC078991.1-201ENST00000437297 610 ntBASIC19.02■□□□□ 0.64
RFC4P35249 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.02■□□□□ 0.64
RFC4P35249 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFC4P35249 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19.02■□□□□ 0.64
RFC4P35249 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC19.02■□□□□ 0.64
RFC4P35249 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC19.02■□□□□ 0.64
RFC4P35249 AC103810.10-201ENST00000606504 343 ntBASIC19.02■□□□□ 0.64
RFC4P35249 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.02■□□□□ 0.64
RFC4P35249 AC051619.9-201ENST00000623237 597 ntBASIC19.02■□□□□ 0.64
RFC4P35249 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFC4P35249 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RFC4P35249 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFC4P35249 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFC4P35249 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.01■□□□□ 0.63
RFC4P35249 AL008718.2-201ENST00000609206 1313 ntBASIC19.01■□□□□ 0.63
RFC4P35249 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RFC4P35249 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.01■□□□□ 0.63
RFC4P35249 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 AC092127.1-201ENST00000567093 3455 ntBASIC19.01■□□□□ 0.63
RFC4P35249 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RFC4P35249 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RFC4P35249 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 AC011840.2-201ENST00000563063 1520 ntBASIC19.01■□□□□ 0.63
RFC4P35249 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.01■□□□□ 0.63
RFC4P35249 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.01■□□□□ 0.63
RFC4P35249 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RFC4P35249 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RFC4P35249 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.01■□□□□ 0.63
RFC4P35249 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RFC4P35249 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC19.01■□□□□ 0.63
RFC4P35249 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC19.01■□□□□ 0.63
RFC4P35249 KLF2P1-201ENST00000447438 1042 ntBASIC19.01■□□□□ 0.63
RFC4P35249 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RFC4P35249 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC19.01■□□□□ 0.63
RFC4P35249 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RFC4P35249 AC132192.2-201ENST00000596206 1147 ntBASIC19.01■□□□□ 0.63
RFC4P35249 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RFC4P35249 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.01■□□□□ 0.63
RFC4P35249 MBLAC2-202ENST00000514906 1936 ntBASIC19.01■□□□□ 0.63
RFC4P35249 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.01■□□□□ 0.63
RFC4P35249 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 AC244394.1-201ENST00000435000 1665 ntBASIC19.01■□□□□ 0.63
RFC4P35249 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFC4P35249 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC19■□□□□ 0.63
RFC4P35249 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RFC4P35249 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19■□□□□ 0.63
RFC4P35249 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 AC239868.1-201ENST00000369385 493 ntBASIC19■□□□□ 0.63
RFC4P35249 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19■□□□□ 0.63
RFC4P35249 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19■□□□□ 0.63
RFC4P35249 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC19■□□□□ 0.63
RFC4P35249 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RFC4P35249 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC19■□□□□ 0.63
RFC4P35249 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC19■□□□□ 0.63
RFC4P35249 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
RFC4P35249 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19■□□□□ 0.63
RFC4P35249 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RFC4P35249 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RFC4P35249 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19■□□□□ 0.63
RFC4P35249 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19■□□□□ 0.63
RFC4P35249 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFC4P35249 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.99■□□□□ 0.63
RFC4P35249 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RFC4P35249 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC4P35249 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms