Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A5P29400 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL4A5P29400 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A5P29400 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A5P29400 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A5P29400 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.89■□□□□ 0.45
COL4A5P29400 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL4A5P29400 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A5P29400 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A5P29400 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.89■□□□□ 0.45
COL4A5P29400 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A5P29400 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.89■□□□□ 0.45
COL4A5P29400 REEP5-205ENST00000504247 480 ntTSL 5 BASIC17.89■□□□□ 0.45
COL4A5P29400 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC17.89■□□□□ 0.45
COL4A5P29400 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.89■□□□□ 0.45
COL4A5P29400 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC17.89■□□□□ 0.45
COL4A5P29400 MIR3180-2-201ENST00000581748 88 ntBASIC17.89■□□□□ 0.45
COL4A5P29400 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.89■□□□□ 0.45
COL4A5P29400 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL4A5P29400 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL4A5P29400 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.88■□□□□ 0.45
COL4A5P29400 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COL4A5P29400 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A5P29400 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.88■□□□□ 0.45
COL4A5P29400 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COL4A5P29400 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COL4A5P29400 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A5P29400 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A5P29400 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.88■□□□□ 0.45
COL4A5P29400 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A5P29400 RN7SL396P-201ENST00000471086 295 ntBASIC17.88■□□□□ 0.45
COL4A5P29400 ALG1L6P-201ENST00000515248 758 ntBASIC17.88■□□□□ 0.45
COL4A5P29400 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A5P29400 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.88■□□□□ 0.45
COL4A5P29400 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.88■□□□□ 0.45
COL4A5P29400 AC007326.1-201ENST00000604539 458 ntBASIC17.88■□□□□ 0.45
COL4A5P29400 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.88■□□□□ 0.45
COL4A5P29400 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A5P29400 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL4A5P29400 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.88■□□□□ 0.45
COL4A5P29400 AIRN-201ENST00000601203 4374 ntBASIC17.88■□□□□ 0.45
COL4A5P29400 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.88■□□□□ 0.45
COL4A5P29400 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COL4A5P29400 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.88■□□□□ 0.45
COL4A5P29400 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A5P29400 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
COL4A5P29400 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.87■□□□□ 0.45
COL4A5P29400 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COL4A5P29400 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.87■□□□□ 0.45
COL4A5P29400 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.87■□□□□ 0.45
COL4A5P29400 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.87■□□□□ 0.45
COL4A5P29400 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.87■□□□□ 0.45
COL4A5P29400 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.87■□□□□ 0.45
COL4A5P29400 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.87■□□□□ 0.45
COL4A5P29400 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A5P29400 LINC00634-202ENST00000505157 222 ntBASIC17.87■□□□□ 0.45
COL4A5P29400 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.87■□□□□ 0.45
COL4A5P29400 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A5P29400 AC006158.1-201ENST00000610661 249 ntBASIC17.87■□□□□ 0.45
COL4A5P29400 AC009145.4-201ENST00000625119 1294 ntBASIC17.87■□□□□ 0.45
COL4A5P29400 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
COL4A5P29400 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.87■□□□□ 0.45
COL4A5P29400 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
COL4A5P29400 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A5P29400 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A5P29400 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A5P29400 CYP2T1P-202ENST00000641596 2535 ntBASIC17.87■□□□□ 0.45
COL4A5P29400 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A5P29400 AC092850.2-201ENST00000623821 2697 ntBASIC17.87■□□□□ 0.45
COL4A5P29400 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A5P29400 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A5P29400 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.87■□□□□ 0.45
COL4A5P29400 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A5P29400 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A5P29400 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.87■□□□□ 0.45
COL4A5P29400 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL4A5P29400 AC004837.1-201ENST00000446267 564 ntBASIC17.87■□□□□ 0.45
COL4A5P29400 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.87■□□□□ 0.45
COL4A5P29400 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.87■□□□□ 0.45
COL4A5P29400 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.87■□□□□ 0.45
COL4A5P29400 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.87■□□□□ 0.45
COL4A5P29400 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.87■□□□□ 0.45
COL4A5P29400 C2orf69P1-201ENST00000563532 1093 ntBASIC17.87■□□□□ 0.45
COL4A5P29400 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.87■□□□□ 0.45
COL4A5P29400 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.87■□□□□ 0.45
COL4A5P29400 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.87■□□□□ 0.45
COL4A5P29400 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A5P29400 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A5P29400 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A5P29400 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
COL4A5P29400 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A5P29400 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.86■□□□□ 0.45
COL4A5P29400 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.86■□□□□ 0.45
COL4A5P29400 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A5P29400 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A5P29400 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A5P29400 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
COL4A5P29400 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A5P29400 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL4A5P29400 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 245.7 ms