Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TTTY23B-201ENST00000442790 549 ntBASIC14.14□□□□□ -0.15
ABCD3P28288 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.14□□□□□ -0.15
ABCD3P28288 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ABCD3P28288 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.14□□□□□ -0.15
ABCD3P28288 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.14□□□□□ -0.15
ABCD3P28288 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.14□□□□□ -0.15
ABCD3P28288 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ABCD3P28288 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ABCD3P28288 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 MROH4P-201ENST00000431302 1578 ntBASIC14.13□□□□□ -0.15
ABCD3P28288 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 NORAD-201ENST00000565493 5339 ntBASIC14.13□□□□□ -0.15
ABCD3P28288 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCD3P28288 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 AC012508.2-201ENST00000567613 1472 ntBASIC14.13□□□□□ -0.15
ABCD3P28288 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ABCD3P28288 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
ABCD3P28288 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCD3P28288 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCD3P28288 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.13□□□□□ -0.15
ABCD3P28288 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCD3P28288 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCD3P28288 GIMAP3P-201ENST00000495150 836 ntBASIC14.13□□□□□ -0.15
ABCD3P28288 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.13□□□□□ -0.15
ABCD3P28288 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ABCD3P28288 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCD3P28288 TDH-203ENST00000531764 1110 ntBASIC14.13□□□□□ -0.15
ABCD3P28288 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCD3P28288 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCD3P28288 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 MIR5189-201ENST00000577370 114 ntBASIC14.13□□□□□ -0.15
ABCD3P28288 AC015936.2-201ENST00000593177 259 ntBASIC14.13□□□□□ -0.15
ABCD3P28288 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCD3P28288 AP005019.2-201ENST00000615104 511 ntBASIC14.13□□□□□ -0.15
ABCD3P28288 AL035252.4-201ENST00000624174 288 ntBASIC14.13□□□□□ -0.15
ABCD3P28288 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCD3P28288 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
ABCD3P28288 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCD3P28288 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ABCD3P28288 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 AL359258.3-201ENST00000622910 2331 ntBASIC14.13□□□□□ -0.15
ABCD3P28288 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCD3P28288 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCD3P28288 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCD3P28288 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
ABCD3P28288 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ABCD3P28288 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.12□□□□□ -0.15
ABCD3P28288 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ABCD3P28288 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCD3P28288 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
ABCD3P28288 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.12□□□□□ -0.15
ABCD3P28288 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCD3P28288 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ABCD3P28288 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms