Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.9□□□□□ -0.18
GDF1P27539 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.9□□□□□ -0.18
GDF1P27539 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
GDF1P27539 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.9□□□□□ -0.18
GDF1P27539 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.9□□□□□ -0.18
GDF1P27539 ACTBP8-201ENST00000403258 1108 ntBASIC13.9□□□□□ -0.18
GDF1P27539 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.9□□□□□ -0.18
GDF1P27539 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.9□□□□□ -0.18
GDF1P27539 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GDF1P27539 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.9□□□□□ -0.18
GDF1P27539 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.9□□□□□ -0.18
GDF1P27539 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.9□□□□□ -0.18
GDF1P27539 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.9□□□□□ -0.18
GDF1P27539 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.9□□□□□ -0.18
GDF1P27539 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.9□□□□□ -0.18
GDF1P27539 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.9□□□□□ -0.18
GDF1P27539 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.9□□□□□ -0.18
GDF1P27539 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GDF1P27539 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GDF1P27539 AC244669.2-201ENST00000612320 853 ntBASIC13.9□□□□□ -0.18
GDF1P27539 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
GDF1P27539 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.9□□□□□ -0.18
GDF1P27539 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.9□□□□□ -0.18
GDF1P27539 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GDF1P27539 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.9□□□□□ -0.18
GDF1P27539 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.9□□□□□ -0.18
GDF1P27539 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.19
GDF1P27539 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
GDF1P27539 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
GDF1P27539 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.89□□□□□ -0.19
GDF1P27539 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
GDF1P27539 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
GDF1P27539 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.89□□□□□ -0.19
GDF1P27539 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
GDF1P27539 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
GDF1P27539 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.89□□□□□ -0.19
GDF1P27539 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.89□□□□□ -0.19
GDF1P27539 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.89□□□□□ -0.19
GDF1P27539 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.89□□□□□ -0.19
GDF1P27539 AC007274.1-201ENST00000439805 662 ntBASIC13.89□□□□□ -0.19
GDF1P27539 RPL7P3-201ENST00000441388 714 ntBASIC13.89□□□□□ -0.19
GDF1P27539 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.89□□□□□ -0.19
GDF1P27539 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.89□□□□□ -0.19
GDF1P27539 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.89□□□□□ -0.19
GDF1P27539 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.89□□□□□ -0.19
GDF1P27539 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
GDF1P27539 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.89□□□□□ -0.19
GDF1P27539 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
GDF1P27539 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.89□□□□□ -0.19
GDF1P27539 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.89□□□□□ -0.19
GDF1P27539 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.89□□□□□ -0.19
GDF1P27539 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.89□□□□□ -0.19
GDF1P27539 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
GDF1P27539 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.89□□□□□ -0.19
GDF1P27539 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.89□□□□□ -0.19
GDF1P27539 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
GDF1P27539 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms