Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LMO1P25800 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.9□□□□□ -0.35
LMO1P25800 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.89□□□□□ -0.35
LMO1P25800 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
LMO1P25800 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LMO1P25800 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
LMO1P25800 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LMO1P25800 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
LMO1P25800 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.89□□□□□ -0.35
LMO1P25800 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.89□□□□□ -0.35
LMO1P25800 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.89□□□□□ -0.35
LMO1P25800 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.89□□□□□ -0.35
LMO1P25800 BASP1P1-201ENST00000430708 665 ntBASIC12.89□□□□□ -0.35
LMO1P25800 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.89□□□□□ -0.35
LMO1P25800 AL512638.1-201ENST00000457493 794 ntBASIC12.89□□□□□ -0.35
LMO1P25800 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.89□□□□□ -0.35
LMO1P25800 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 AC004066.1-201ENST00000502488 802 ntBASIC12.89□□□□□ -0.35
LMO1P25800 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.89□□□□□ -0.35
LMO1P25800 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.89□□□□□ -0.35
LMO1P25800 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.89□□□□□ -0.35
LMO1P25800 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO1P25800 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
LMO1P25800 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.88□□□□□ -0.35
LMO1P25800 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.88□□□□□ -0.35
LMO1P25800 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.88□□□□□ -0.35
LMO1P25800 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
LMO1P25800 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.88□□□□□ -0.35
LMO1P25800 AC140479.7-201ENST00000636301 2332 ntBASIC12.88□□□□□ -0.35
LMO1P25800 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LMO1P25800 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.88□□□□□ -0.35
LMO1P25800 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
LMO1P25800 MRPS18AP1-201ENST00000414458 589 ntBASIC12.88□□□□□ -0.35
LMO1P25800 MEP1AP4-201ENST00000423244 1087 ntBASIC12.88□□□□□ -0.35
LMO1P25800 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.88□□□□□ -0.35
LMO1P25800 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LMO1P25800 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.88□□□□□ -0.35
LMO1P25800 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LMO1P25800 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms