Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL1P22362 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL1P22362 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCL1P22362 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CCL1P22362 AC018665.1-201ENST00000622927 1362 ntBASIC13.18□□□□□ -0.3
CCL1P22362 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCL1P22362 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL1P22362 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CCL1P22362 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CCL1P22362 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 AC015802.1-201ENST00000588104 1449 ntBASIC13.17□□□□□ -0.3
CCL1P22362 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL1P22362 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL1P22362 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 AL589987.1-201ENST00000453380 819 ntBASIC13.17□□□□□ -0.3
CCL1P22362 TPT1P11-201ENST00000458482 498 ntBASIC13.17□□□□□ -0.3
CCL1P22362 SPDYE18-201ENST00000510091 1050 ntBASIC13.17□□□□□ -0.3
CCL1P22362 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL1P22362 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CCL1P22362 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 RARRES2P5-201ENST00000564013 466 ntBASIC13.17□□□□□ -0.3
CCL1P22362 AC036164.1-201ENST00000570544 333 ntBASIC13.17□□□□□ -0.3
CCL1P22362 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL1P22362 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL1P22362 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL1P22362 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL1P22362 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL1P22362 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL1P22362 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCL1P22362 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL1P22362 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL1P22362 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL1P22362 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL1P22362 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCL1P22362 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL1P22362 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CCL1P22362 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL1P22362 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL1P22362 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCL1P22362 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.16□□□□□ -0.3
CCL1P22362 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL1P22362 FAM86LP-201ENST00000478302 853 ntBASIC13.16□□□□□ -0.3
CCL1P22362 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL1P22362 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.16□□□□□ -0.3
CCL1P22362 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL1P22362 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL1P22362 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL1P22362 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL1P22362 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms