Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH3P22223 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH3P22223 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH3P22223 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH3P22223 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH3P22223 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH3P22223 AL603832.2-201ENST00000566195 2125 ntBASIC15.13■□□□□ 0.01
CDH3P22223 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH3P22223 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH3P22223 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDH3P22223 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDH3P22223 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH3P22223 PPT1-215ENST00000641471 2368 ntBASIC15.12■□□□□ 0.01
CDH3P22223 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH3P22223 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CDH3P22223 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CDH3P22223 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDH3P22223 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
CDH3P22223 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDH3P22223 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH3P22223 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CDH3P22223 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH3P22223 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH3P22223 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH3P22223 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH3P22223 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH3P22223 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH3P22223 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH3P22223 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH3P22223 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.12■□□□□ 0.01
CDH3P22223 CTBP2P3-201ENST00000585629 1255 ntBASIC15.12■□□□□ 0.01
CDH3P22223 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH3P22223 TMEM261P1-201ENST00000604899 340 ntBASIC15.12■□□□□ 0.01
CDH3P22223 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH3P22223 MIR8072-201ENST00000614241 80 ntBASIC15.12■□□□□ 0.01
CDH3P22223 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH3P22223 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDH3P22223 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH3P22223 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH3P22223 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH3P22223 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH3P22223 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDH3P22223 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.11■□□□□ 0.01
CDH3P22223 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDH3P22223 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDH3P22223 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.11■□□□□ 0.01
CDH3P22223 AC112504.1-201ENST00000623415 1841 ntBASIC15.11■□□□□ 0.01
CDH3P22223 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.11■□□□□ 0.01
CDH3P22223 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.11■□□□□ 0.01
CDH3P22223 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CDH3P22223 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDH3P22223 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.11■□□□□ 0.01
CDH3P22223 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.11■□□□□ 0.01
CDH3P22223 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 FAM86LP-201ENST00000478302 853 ntBASIC15.11■□□□□ 0.01
CDH3P22223 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CDH3P22223 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.11■□□□□ 0.01
CDH3P22223 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.11■□□□□ 0.01
CDH3P22223 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH3P22223 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.11■□□□□ 0.01
CDH3P22223 MIR4313-201ENST00000580760 101 ntBASIC15.11■□□□□ 0.01
CDH3P22223 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.11■□□□□ 0.01
CDH3P22223 AL391069.4-201ENST00000609583 481 ntBASIC15.11■□□□□ 0.01
CDH3P22223 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.11■□□□□ 0.01
CDH3P22223 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms