Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
ERCC3P19447 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERCC3P19447 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERCC3P19447 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.77■□□□□ 0.43
ERCC3P19447 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ERCC3P19447 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ERCC3P19447 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ERCC3P19447 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.77■□□□□ 0.43
ERCC3P19447 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.76■□□□□ 0.43
ERCC3P19447 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ERCC3P19447 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 AHCYP2-201ENST00000430630 1300 ntBASIC17.76■□□□□ 0.43
ERCC3P19447 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.76■□□□□ 0.43
ERCC3P19447 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ERCC3P19447 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ERCC3P19447 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.76■□□□□ 0.43
ERCC3P19447 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.76■□□□□ 0.43
ERCC3P19447 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.76■□□□□ 0.43
ERCC3P19447 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.76■□□□□ 0.43
ERCC3P19447 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.76■□□□□ 0.43
ERCC3P19447 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.76■□□□□ 0.43
ERCC3P19447 MIR4741-201ENST00000579822 90 ntBASIC17.76■□□□□ 0.43
ERCC3P19447 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.76■□□□□ 0.43
ERCC3P19447 AC068587.10-201ENST00000641210 219 ntBASIC17.76■□□□□ 0.43
ERCC3P19447 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ERCC3P19447 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.76■□□□□ 0.43
ERCC3P19447 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
ERCC3P19447 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 AP005117.1-202ENST00000581724 1908 ntBASIC17.76■□□□□ 0.43
ERCC3P19447 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ERCC3P19447 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ERCC3P19447 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.76■□□□□ 0.43
ERCC3P19447 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.75■□□□□ 0.43
ERCC3P19447 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 CICP13-201ENST00000422015 2789 ntBASIC17.75■□□□□ 0.43
ERCC3P19447 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ERCC3P19447 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ERCC3P19447 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ERCC3P19447 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ERCC3P19447 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ERCC3P19447 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ERCC3P19447 Z93015.1-201ENST00000451718 390 ntBASIC17.75■□□□□ 0.43
ERCC3P19447 KRT8P13-201ENST00000463294 1010 ntBASIC17.75■□□□□ 0.43
ERCC3P19447 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 RNA5SP486-201ENST00000515961 83 ntBASIC17.75■□□□□ 0.43
ERCC3P19447 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.75■□□□□ 0.43
ERCC3P19447 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.75■□□□□ 0.43
ERCC3P19447 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.75■□□□□ 0.43
ERCC3P19447 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.75■□□□□ 0.43
ERCC3P19447 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.75■□□□□ 0.43
ERCC3P19447 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ERCC3P19447 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ERCC3P19447 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.74■□□□□ 0.43
ERCC3P19447 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.74■□□□□ 0.43
ERCC3P19447 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ERCC3P19447 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms