Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
VCLP18206 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
VCLP18206 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VCLP18206 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.5■□□□□ 0.07
VCLP18206 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.5■□□□□ 0.07
VCLP18206 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.5■□□□□ 0.07
VCLP18206 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
VCLP18206 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
VCLP18206 RPL13P2-201ENST00000440687 659 ntBASIC15.5■□□□□ 0.07
VCLP18206 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.5■□□□□ 0.07
VCLP18206 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.5■□□□□ 0.07
VCLP18206 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.5■□□□□ 0.07
VCLP18206 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VCLP18206 RRP7BP-205ENST00000566851 833 ntBASIC15.5■□□□□ 0.07
VCLP18206 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.5■□□□□ 0.07
VCLP18206 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.5■□□□□ 0.07
VCLP18206 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.5■□□□□ 0.07
VCLP18206 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.5■□□□□ 0.07
VCLP18206 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VCLP18206 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VCLP18206 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VCLP18206 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VCLP18206 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VCLP18206 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
VCLP18206 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
VCLP18206 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
VCLP18206 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
VCLP18206 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
VCLP18206 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 AC005840.4-201ENST00000541242 2494 ntBASIC15.49■□□□□ 0.07
VCLP18206 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.49■□□□□ 0.07
VCLP18206 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
VCLP18206 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.49■□□□□ 0.07
VCLP18206 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.49■□□□□ 0.07
VCLP18206 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.49■□□□□ 0.07
VCLP18206 GNAQP1-201ENST00000444815 1067 ntBASIC15.49■□□□□ 0.07
VCLP18206 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.49■□□□□ 0.07
VCLP18206 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 SPDYE18-201ENST00000510091 1050 ntBASIC15.49■□□□□ 0.07
VCLP18206 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.49■□□□□ 0.07
VCLP18206 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.49■□□□□ 0.07
VCLP18206 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.49■□□□□ 0.07
VCLP18206 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.49■□□□□ 0.07
VCLP18206 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.49■□□□□ 0.07
VCLP18206 AC097359.3-201ENST00000603982 1210 ntBASIC15.49■□□□□ 0.07
VCLP18206 LINC01115-203ENST00000606068 577 ntBASIC15.49■□□□□ 0.07
VCLP18206 LINC02084-201ENST00000606069 1096 ntBASIC15.49■□□□□ 0.07
VCLP18206 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
VCLP18206 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.49■□□□□ 0.07
VCLP18206 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.49■□□□□ 0.07
VCLP18206 AC127383.1-201ENST00000444697 1800 ntBASIC15.49■□□□□ 0.07
VCLP18206 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.49■□□□□ 0.07
VCLP18206 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
VCLP18206 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
VCLP18206 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 AL607033.1-201ENST00000623900 1599 ntBASIC15.49■□□□□ 0.07
VCLP18206 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.49■□□□□ 0.07
VCLP18206 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.49■□□□□ 0.07
VCLP18206 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCLP18206 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.48■□□□□ 0.07
VCLP18206 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VCLP18206 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VCLP18206 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms