Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PDGFRAP16234 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFRAP16234 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFRAP16234 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PDGFRAP16234 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.11■□□□□ 0.17
PDGFRAP16234 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFRAP16234 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFRAP16234 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFRAP16234 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFRAP16234 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PDGFRAP16234 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFRAP16234 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFRAP16234 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PDGFRAP16234 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.11■□□□□ 0.17
PDGFRAP16234 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PDGFRAP16234 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
PDGFRAP16234 REXO1L2P-201ENST00000425429 2069 ntBASIC16.1■□□□□ 0.17
PDGFRAP16234 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PDGFRAP16234 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.1■□□□□ 0.17
PDGFRAP16234 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PDGFRAP16234 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PDGFRAP16234 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.1■□□□□ 0.17
PDGFRAP16234 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.1■□□□□ 0.17
PDGFRAP16234 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.1■□□□□ 0.17
PDGFRAP16234 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.1■□□□□ 0.17
PDGFRAP16234 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PDGFRAP16234 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
PDGFRAP16234 AC134915.1-201ENST00000426461 574 ntBASIC16.1■□□□□ 0.17
PDGFRAP16234 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.1■□□□□ 0.17
PDGFRAP16234 ELK1P1-201ENST00000485699 580 ntBASIC16.1■□□□□ 0.17
PDGFRAP16234 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.1■□□□□ 0.17
PDGFRAP16234 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.1■□□□□ 0.17
PDGFRAP16234 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.1■□□□□ 0.17
PDGFRAP16234 AL035252.4-201ENST00000624174 288 ntBASIC16.1■□□□□ 0.17
PDGFRAP16234 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.1■□□□□ 0.17
PDGFRAP16234 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PDGFRAP16234 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 AL138799.1-201ENST00000448213 1675 ntBASIC16.1■□□□□ 0.17
PDGFRAP16234 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.1■□□□□ 0.17
PDGFRAP16234 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PDGFRAP16234 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.1■□□□□ 0.17
PDGFRAP16234 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.1■□□□□ 0.17
PDGFRAP16234 AC011270.2-201ENST00000624293 2550 ntBASIC16.1■□□□□ 0.17
PDGFRAP16234 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PDGFRAP16234 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDGFRAP16234 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PDGFRAP16234 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.1■□□□□ 0.17
PDGFRAP16234 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFRAP16234 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFRAP16234 AC007787.1-201ENST00000588095 1583 ntBASIC16.09■□□□□ 0.17
PDGFRAP16234 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFRAP16234 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFRAP16234 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
PDGFRAP16234 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFRAP16234 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFRAP16234 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.09■□□□□ 0.17
PDGFRAP16234 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PDGFRAP16234 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFRAP16234 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.09■□□□□ 0.17
PDGFRAP16234 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFRAP16234 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PDGFRAP16234 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
PDGFRAP16234 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFRAP16234 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PDGFRAP16234 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.09■□□□□ 0.17
PDGFRAP16234 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFRAP16234 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFRAP16234 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.09■□□□□ 0.17
PDGFRAP16234 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.09■□□□□ 0.17
PDGFRAP16234 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.09■□□□□ 0.17
PDGFRAP16234 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.09■□□□□ 0.17
PDGFRAP16234 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PDGFRAP16234 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.09■□□□□ 0.17
PDGFRAP16234 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.09■□□□□ 0.17
PDGFRAP16234 AC092552.1-201ENST00000547243 906 ntBASIC16.09■□□□□ 0.17
PDGFRAP16234 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFRAP16234 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.09■□□□□ 0.17
PDGFRAP16234 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.09■□□□□ 0.17
PDGFRAP16234 CTBP2P3-201ENST00000585629 1255 ntBASIC16.09■□□□□ 0.17
PDGFRAP16234 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.09■□□□□ 0.17
PDGFRAP16234 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PDGFRAP16234 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDGFRAP16234 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms