Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCP1P13796 AC093525.8-201ENST00000624099 1342 ntBASIC16.16■□□□□ 0.18
LCP1P13796 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LCP1P13796 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCP1P13796 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LCP1P13796 REXO1L4P-201ENST00000605109 1937 ntBASIC16.15■□□□□ 0.18
LCP1P13796 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LCP1P13796 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.15■□□□□ 0.18
LCP1P13796 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.15■□□□□ 0.18
LCP1P13796 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LCP1P13796 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.15■□□□□ 0.18
LCP1P13796 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.15■□□□□ 0.18
LCP1P13796 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.15■□□□□ 0.18
LCP1P13796 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 TDH-203ENST00000531764 1110 ntBASIC16.15■□□□□ 0.18
LCP1P13796 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.15■□□□□ 0.18
LCP1P13796 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.15■□□□□ 0.18
LCP1P13796 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
LCP1P13796 RPSAP52-203ENST00000622976 1023 ntBASIC16.15■□□□□ 0.18
LCP1P13796 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.15■□□□□ 0.18
LCP1P13796 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.15■□□□□ 0.18
LCP1P13796 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.15■□□□□ 0.18
LCP1P13796 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.15■□□□□ 0.18
LCP1P13796 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.15■□□□□ 0.18
LCP1P13796 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCP1P13796 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.14■□□□□ 0.18
LCP1P13796 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
LCP1P13796 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.14■□□□□ 0.17
LCP1P13796 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.14■□□□□ 0.17
LCP1P13796 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.14■□□□□ 0.17
LCP1P13796 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.14■□□□□ 0.17
LCP1P13796 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 AC005034.1-201ENST00000426657 489 ntBASIC16.14■□□□□ 0.17
LCP1P13796 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.14■□□□□ 0.17
LCP1P13796 AC093433.1-201ENST00000458048 571 ntBASIC16.14■□□□□ 0.17
LCP1P13796 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LCP1P13796 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 AP001063.1-201ENST00000568332 529 ntBASIC16.14■□□□□ 0.17
LCP1P13796 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.14■□□□□ 0.17
LCP1P13796 AP000845.1-201ENST00000581677 2131 ntBASIC16.14■□□□□ 0.17
LCP1P13796 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.14■□□□□ 0.17
LCP1P13796 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.14■□□□□ 0.17
LCP1P13796 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.14■□□□□ 0.17
LCP1P13796 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.14■□□□□ 0.17
LCP1P13796 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LCP1P13796 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 AL161772.1-201ENST00000610494 4412 ntBASIC16.14■□□□□ 0.17
LCP1P13796 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
LCP1P13796 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LCP1P13796 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.14■□□□□ 0.17
LCP1P13796 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.14■□□□□ 0.17
LCP1P13796 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
LCP1P13796 PCDHA3-202ENST00000532566 4594 ntBASIC16.14■□□□□ 0.17
LCP1P13796 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 MSTO2P-201ENST00000314835 1709 ntBASIC16.14■□□□□ 0.17
LCP1P13796 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCP1P13796 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCP1P13796 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCP1P13796 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
LCP1P13796 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.13■□□□□ 0.17
LCP1P13796 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LCP1P13796 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCP1P13796 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCP1P13796 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCP1P13796 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCP1P13796 AL157414.3-201ENST00000624276 1954 ntBASIC16.13■□□□□ 0.17
LCP1P13796 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LCP1P13796 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.13■□□□□ 0.17
LCP1P13796 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.13■□□□□ 0.17
LCP1P13796 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms