Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.45■□□□□ 0.06
VCANP13611 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.45■□□□□ 0.06
VCANP13611 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
VCANP13611 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
VCANP13611 PCDHB19P-201ENST00000570871 2371 ntBASIC15.45■□□□□ 0.06
VCANP13611 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.45■□□□□ 0.06
VCANP13611 FTH1P22-201ENST00000456305 520 ntBASIC15.45■□□□□ 0.06
VCANP13611 RN7SL81P-201ENST00000493781 261 ntBASIC15.45■□□□□ 0.06
VCANP13611 IGHEP2-201ENST00000519308 1256 ntBASIC15.45■□□□□ 0.06
VCANP13611 INO80E-209ENST00000567254 625 ntTSL 2 BASIC15.45■□□□□ 0.06
VCANP13611 DERL2-206ENST00000572834 589 ntTSL 3 BASIC15.45■□□□□ 0.06
VCANP13611 MIR2392-201ENST00000584881 84 ntBASIC15.45■□□□□ 0.06
VCANP13611 CYP4F36P-201ENST00000589193 186 ntBASIC15.45■□□□□ 0.06
VCANP13611 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
VCANP13611 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
VCANP13611 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.44■□□□□ 0.06
VCANP13611 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.44■□□□□ 0.06
VCANP13611 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.44■□□□□ 0.06
VCANP13611 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
VCANP13611 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 AC006328.1-201ENST00000437571 379 ntBASIC15.44■□□□□ 0.06
VCANP13611 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.44■□□□□ 0.06
VCANP13611 BCRP4-201ENST00000506079 804 ntBASIC15.44■□□□□ 0.06
VCANP13611 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC15.44■□□□□ 0.06
VCANP13611 GOLGA2P7-209ENST00000560408 745 ntBASIC15.44■□□□□ 0.06
VCANP13611 RN7SL300P-201ENST00000582522 318 ntBASIC15.44■□□□□ 0.06
VCANP13611 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.44■□□□□ 0.06
VCANP13611 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
VCANP13611 PRAL-201ENST00000624952 3286 ntBASIC15.44■□□□□ 0.06
VCANP13611 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.44■□□□□ 0.06
VCANP13611 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
VCANP13611 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
VCANP13611 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.44■□□□□ 0.06
VCANP13611 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 PTGER4P2-201ENST00000328411 252 ntBASIC15.44■□□□□ 0.06
VCANP13611 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.44■□□□□ 0.06
VCANP13611 PTGER4P3-201ENST00000458150 252 ntBASIC15.44■□□□□ 0.06
VCANP13611 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC15.44■□□□□ 0.06
VCANP13611 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
VCANP13611 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC15.44■□□□□ 0.06
VCANP13611 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC15.44■□□□□ 0.06
VCANP13611 SCARNA12-201ENST00000459155 270 ntBASIC15.44■□□□□ 0.06
VCANP13611 RPS18P9-201ENST00000482817 460 ntBASIC15.44■□□□□ 0.06
VCANP13611 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.44■□□□□ 0.06
VCANP13611 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC15.44■□□□□ 0.06
VCANP13611 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC15.44■□□□□ 0.06
VCANP13611 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCANP13611 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
VCANP13611 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
VCANP13611 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
VCANP13611 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.43■□□□□ 0.06
VCANP13611 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.43■□□□□ 0.06
VCANP13611 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
VCANP13611 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
VCANP13611 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
VCANP13611 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
VCANP13611 TPT1P6-201ENST00000458298 514 ntBASIC15.43■□□□□ 0.06
VCANP13611 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC15.43■□□□□ 0.06
VCANP13611 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.43■□□□□ 0.06
VCANP13611 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
VCANP13611 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 AL138725.1-201ENST00000407347 1314 ntBASIC15.43■□□□□ 0.06
VCANP13611 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC15.43■□□□□ 0.06
VCANP13611 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.43■□□□□ 0.06
VCANP13611 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VCANP13611 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms