Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL596257.1-201ENST00000641463 2694 ntBASIC12.02□□□□□ -0.49
CD28P10747 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.02□□□□□ -0.49
CD28P10747 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.02□□□□□ -0.49
CD28P10747 CNN2P8-201ENST00000421872 913 ntBASIC12.02□□□□□ -0.49
CD28P10747 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.02□□□□□ -0.49
CD28P10747 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.02□□□□□ -0.49
CD28P10747 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.02□□□□□ -0.49
CD28P10747 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.02□□□□□ -0.49
CD28P10747 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CD28P10747 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.02□□□□□ -0.49
CD28P10747 RN7SL560P-201ENST00000577943 264 ntBASIC12.02□□□□□ -0.49
CD28P10747 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.02□□□□□ -0.49
CD28P10747 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.02□□□□□ -0.49
CD28P10747 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.02□□□□□ -0.49
CD28P10747 AC025181.2-201ENST00000606994 802 ntBASIC12.02□□□□□ -0.49
CD28P10747 MIR6787-201ENST00000616675 61 ntBASIC12.02□□□□□ -0.49
CD28P10747 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.02□□□□□ -0.49
CD28P10747 AC138951.2-201ENST00000623455 1161 ntBASIC12.02□□□□□ -0.49
CD28P10747 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.02□□□□□ -0.49
CD28P10747 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CD28P10747 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.02□□□□□ -0.49
CD28P10747 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.02□□□□□ -0.49
CD28P10747 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.02□□□□□ -0.49
CD28P10747 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 KRT8P44-201ENST00000441609 1350 ntBASIC12.02□□□□□ -0.49
CD28P10747 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.02□□□□□ -0.49
CD28P10747 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CD28P10747 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.02□□□□□ -0.49
CD28P10747 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
CD28P10747 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CD28P10747 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.01□□□□□ -0.49
CD28P10747 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.01□□□□□ -0.49
CD28P10747 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CD28P10747 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CD28P10747 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.01□□□□□ -0.49
CD28P10747 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.01□□□□□ -0.49
CD28P10747 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CD28P10747 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.01□□□□□ -0.49
CD28P10747 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.01□□□□□ -0.49
CD28P10747 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.01□□□□□ -0.49
CD28P10747 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.01□□□□□ -0.49
CD28P10747 PFN1P12-201ENST00000455938 534 ntBASIC12.01□□□□□ -0.49
CD28P10747 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.01□□□□□ -0.49
CD28P10747 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.01□□□□□ -0.49
CD28P10747 AC078819.1-201ENST00000547454 765 ntBASIC12.01□□□□□ -0.49
CD28P10747 AC012085.1-201ENST00000548270 765 ntBASIC12.01□□□□□ -0.49
CD28P10747 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.01□□□□□ -0.49
CD28P10747 AC023310.1-201ENST00000554836 735 ntBASIC12.01□□□□□ -0.49
CD28P10747 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.01□□□□□ -0.49
CD28P10747 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.01□□□□□ -0.49
CD28P10747 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.01□□□□□ -0.49
CD28P10747 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.01□□□□□ -0.49
CD28P10747 AC008687.7-202ENST00000637404 953 ntBASIC12.01□□□□□ -0.49
CD28P10747 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.01□□□□□ -0.49
CD28P10747 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
CD28P10747 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.01□□□□□ -0.49
CD28P10747 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.01□□□□□ -0.49
CD28P10747 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD28P10747 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms