Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
UBCP0CG48 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.53□□□□□ -0.24
UBCP0CG48 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.53□□□□□ -0.24
UBCP0CG48 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBCP0CG48 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBCP0CG48 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
UBCP0CG48 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBCP0CG48 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBCP0CG48 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBCP0CG48 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
UBCP0CG48 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.52□□□□□ -0.24
UBCP0CG48 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UBCP0CG48 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBCP0CG48 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBCP0CG48 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UBCP0CG48 AC007686.3-201ENST00000619017 3487 ntBASIC13.52□□□□□ -0.25
UBCP0CG48 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
UBCP0CG48 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.52□□□□□ -0.25
UBCP0CG48 AC004461.1-201ENST00000412461 403 ntBASIC13.52□□□□□ -0.25
UBCP0CG48 SPDYE14P-201ENST00000442619 822 ntBASIC13.52□□□□□ -0.25
UBCP0CG48 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBCP0CG48 YBX1P5-201ENST00000509441 847 ntBASIC13.52□□□□□ -0.25
UBCP0CG48 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.52□□□□□ -0.25
UBCP0CG48 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.52□□□□□ -0.25
UBCP0CG48 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.52□□□□□ -0.25
UBCP0CG48 AC004835.2-201ENST00000603762 682 ntBASIC13.52□□□□□ -0.25
UBCP0CG48 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
UBCP0CG48 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBCP0CG48 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBCP0CG48 AC012508.2-201ENST00000567613 1472 ntBASIC13.52□□□□□ -0.25
UBCP0CG48 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBCP0CG48 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UBCP0CG48 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBCP0CG48 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBCP0CG48 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
UBCP0CG48 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.52□□□□□ -0.25
UBCP0CG48 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.52□□□□□ -0.25
UBCP0CG48 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
UBCP0CG48 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBCP0CG48 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.52□□□□□ -0.25
UBCP0CG48 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.52□□□□□ -0.25
UBCP0CG48 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
UBCP0CG48 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBCP0CG48 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.52□□□□□ -0.25
UBCP0CG48 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UBCP0CG48 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.52□□□□□ -0.25
UBCP0CG48 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
UBCP0CG48 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
UBCP0CG48 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBCP0CG48 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.51□□□□□ -0.25
UBCP0CG48 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
UBCP0CG48 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
UBCP0CG48 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.51□□□□□ -0.25
UBCP0CG48 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.51□□□□□ -0.25
UBCP0CG48 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
UBCP0CG48 PTENP1-202ENST00000532280 3996 ntBASIC13.51□□□□□ -0.25
UBCP0CG48 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.51□□□□□ -0.25
UBCP0CG48 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.51□□□□□ -0.25
UBCP0CG48 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.51□□□□□ -0.25
UBCP0CG48 SPDYE7P-202ENST00000420373 878 ntBASIC13.51□□□□□ -0.25
UBCP0CG48 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.51□□□□□ -0.25
UBCP0CG48 GPS2P2-201ENST00000430745 888 ntBASIC13.51□□□□□ -0.25
UBCP0CG48 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBCP0CG48 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.51□□□□□ -0.25
UBCP0CG48 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.51□□□□□ -0.25
UBCP0CG48 AL079307.3-201ENST00000556114 283 ntBASIC13.51□□□□□ -0.25
UBCP0CG48 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
UBCP0CG48 AC093520.2-201ENST00000561830 333 ntBASIC13.51□□□□□ -0.25
UBCP0CG48 AC026150.2-201ENST00000564693 1156 ntBASIC13.51□□□□□ -0.25
UBCP0CG48 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.51□□□□□ -0.25
UBCP0CG48 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.51□□□□□ -0.25
UBCP0CG48 MIR6080-201ENST00000617359 66 ntBASIC13.51□□□□□ -0.25
UBCP0CG48 AC009093.7-201ENST00000623853 1223 ntBASIC13.51□□□□□ -0.25
UBCP0CG48 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.51□□□□□ -0.25
UBCP0CG48 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UBCP0CG48 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms