Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.34■□□□□ 0.53
CHGBP05060 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.34■□□□□ 0.53
CHGBP05060 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.34■□□□□ 0.53
CHGBP05060 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CHGBP05060 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.34■□□□□ 0.53
CHGBP05060 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHGBP05060 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHGBP05060 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHGBP05060 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHGBP05060 AC012508.2-201ENST00000567613 1472 ntBASIC18.33■□□□□ 0.53
CHGBP05060 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CHGBP05060 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHGBP05060 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CHGBP05060 AC055811.4-201ENST00000624039 1754 ntBASIC18.33■□□□□ 0.53
CHGBP05060 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHGBP05060 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHGBP05060 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHGBP05060 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHGBP05060 MIR658-201ENST00000385210 100 ntBASIC18.33■□□□□ 0.52
CHGBP05060 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CHGBP05060 AL355864.2-201ENST00000447420 863 ntBASIC18.33■□□□□ 0.52
CHGBP05060 AC114812.1-204ENST00000449669 728 ntBASIC18.33■□□□□ 0.52
CHGBP05060 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.33■□□□□ 0.52
CHGBP05060 GPR53P-205ENST00000457298 1084 ntBASIC18.33■□□□□ 0.52
CHGBP05060 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.33■□□□□ 0.52
CHGBP05060 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.33■□□□□ 0.52
CHGBP05060 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.33■□□□□ 0.52
CHGBP05060 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.33■□□□□ 0.52
CHGBP05060 AC078819.1-201ENST00000547454 765 ntBASIC18.33■□□□□ 0.52
CHGBP05060 AC012085.1-201ENST00000548270 765 ntBASIC18.33■□□□□ 0.52
CHGBP05060 KRT90P-201ENST00000549264 1064 ntBASIC18.33■□□□□ 0.52
CHGBP05060 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.33■□□□□ 0.52
CHGBP05060 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.33■□□□□ 0.52
CHGBP05060 DUX4L47-201ENST00000566374 394 ntBASIC18.33■□□□□ 0.52
CHGBP05060 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.33■□□□□ 0.52
CHGBP05060 ECM1P1-201ENST00000604092 1279 ntBASIC18.33■□□□□ 0.52
CHGBP05060 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.33■□□□□ 0.52
CHGBP05060 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.33■□□□□ 0.52
CHGBP05060 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.33■□□□□ 0.52
CHGBP05060 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.33■□□□□ 0.52
CHGBP05060 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHGBP05060 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CHGBP05060 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CHGBP05060 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHGBP05060 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHGBP05060 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHGBP05060 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.33■□□□□ 0.52
CHGBP05060 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.33■□□□□ 0.52
CHGBP05060 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CHGBP05060 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.33■□□□□ 0.52
CHGBP05060 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHGBP05060 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHGBP05060 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHGBP05060 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CHGBP05060 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHGBP05060 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CHGBP05060 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.32■□□□□ 0.52
CHGBP05060 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.32■□□□□ 0.52
CHGBP05060 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.32■□□□□ 0.52
CHGBP05060 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.32■□□□□ 0.52
CHGBP05060 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 LILRP1-201ENST00000444199 1370 ntBASIC18.32■□□□□ 0.52
CHGBP05060 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHGBP05060 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.32■□□□□ 0.52
CHGBP05060 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.32■□□□□ 0.52
CHGBP05060 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.32■□□□□ 0.52
CHGBP05060 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.32■□□□□ 0.52
CHGBP05060 AC026954.1-201ENST00000429771 1293 ntBASIC18.32■□□□□ 0.52
CHGBP05060 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHGBP05060 ATP5G2P4-201ENST00000442175 420 ntBASIC18.32■□□□□ 0.52
CHGBP05060 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.32■□□□□ 0.52
CHGBP05060 AP003171.2-201ENST00000528208 925 ntBASIC18.32■□□□□ 0.52
CHGBP05060 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.32■□□□□ 0.52
CHGBP05060 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.32■□□□□ 0.52
CHGBP05060 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.32■□□□□ 0.52
CHGBP05060 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.32■□□□□ 0.52
CHGBP05060 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.32■□□□□ 0.52
CHGBP05060 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CHGBP05060 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.32■□□□□ 0.52
CHGBP05060 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHGBP05060 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 AC023090.2-201ENST00000625182 2110 ntBASIC18.32■□□□□ 0.52
CHGBP05060 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.32■□□□□ 0.52
CHGBP05060 CICP24-201ENST00000605464 2705 ntBASIC18.32■□□□□ 0.52
CHGBP05060 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms