Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
P04436 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14□□□□□ -0.17
P04436 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14□□□□□ -0.17
P04436 PRSS30P-206ENST00000641773 873 ntBASIC14□□□□□ -0.17
P04436 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
P04436 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14□□□□□ -0.17
P04436 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P04436 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P04436 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14□□□□□ -0.17
P04436 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P04436 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14□□□□□ -0.17
P04436 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
P04436 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14□□□□□ -0.17
P04436 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
P04436 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P04436 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14□□□□□ -0.17
P04436 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P04436 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14□□□□□ -0.17
P04436 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
P04436 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14□□□□□ -0.17
P04436 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14□□□□□ -0.17
P04436 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P04436 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.99□□□□□ -0.17
P04436 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.99□□□□□ -0.17
P04436 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
P04436 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.99□□□□□ -0.17
P04436 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.99□□□□□ -0.17
P04436 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
P04436 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
P04436 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.99□□□□□ -0.17
P04436 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.99□□□□□ -0.17
P04436 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
P04436 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.99□□□□□ -0.17
P04436 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.99□□□□□ -0.17
P04436 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.99□□□□□ -0.17
P04436 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.99□□□□□ -0.17
P04436 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.99□□□□□ -0.17
P04436 AC025279.2-201ENST00000569730 653 ntBASIC13.99□□□□□ -0.17
P04436 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.99□□□□□ -0.17
P04436 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.99□□□□□ -0.17
P04436 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.99□□□□□ -0.17
P04436 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.99□□□□□ -0.17
P04436 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.99□□□□□ -0.17
P04436 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
P04436 PAUPAR-201ENST00000630360 2965 ntBASIC13.99□□□□□ -0.17
P04436 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
P04436 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
P04436 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04436 KRT8P14-201ENST00000414254 1442 ntBASIC13.98□□□□□ -0.17
P04436 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.98□□□□□ -0.17
P04436 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04436 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.98□□□□□ -0.17
P04436 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04436 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04436 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
P04436 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04436 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
P04436 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.98□□□□□ -0.17
P04436 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04436 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04436 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04436 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04436 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.98□□□□□ -0.17
P04436 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04436 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.98□□□□□ -0.17
P04436 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.98□□□□□ -0.17
P04436 RPS2P32-201ENST00000439199 892 ntBASIC13.98□□□□□ -0.17
P04436 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.98□□□□□ -0.17
P04436 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.98□□□□□ -0.17
P04436 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
P04436 AP000812.2-201ENST00000538934 718 ntBASIC13.98□□□□□ -0.17
P04436 KRT90P-201ENST00000549264 1064 ntBASIC13.98□□□□□ -0.17
P04436 AC244669.2-201ENST00000612320 853 ntBASIC13.98□□□□□ -0.17
P04436 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.98□□□□□ -0.17
P04436 AC132938.4-201ENST00000623835 848 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms