Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC023908.3-201ENST00000564211 3047 ntBASIC14.44□□□□□ -0.1
PDGFAP04085 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.44□□□□□ -0.1
PDGFAP04085 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 AC073347.1-201ENST00000421633 2643 ntBASIC14.44□□□□□ -0.1
PDGFAP04085 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.43□□□□□ -0.1
PDGFAP04085 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.43□□□□□ -0.1
PDGFAP04085 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.43□□□□□ -0.1
PDGFAP04085 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.43□□□□□ -0.1
PDGFAP04085 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.43□□□□□ -0.1
PDGFAP04085 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.43□□□□□ -0.1
PDGFAP04085 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.43□□□□□ -0.1
PDGFAP04085 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.43□□□□□ -0.1
PDGFAP04085 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC14.43□□□□□ -0.1
PDGFAP04085 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.43□□□□□ -0.1
PDGFAP04085 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.43□□□□□ -0.1
PDGFAP04085 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.43□□□□□ -0.1
PDGFAP04085 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.43□□□□□ -0.1
PDGFAP04085 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PDGFAP04085 RHOXF1P1-202ENST00000635473 501 ntBASIC14.43□□□□□ -0.1
PDGFAP04085 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PDGFAP04085 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.43□□□□□ -0.1
PDGFAP04085 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.43□□□□□ -0.1
PDGFAP04085 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.43□□□□□ -0.1
PDGFAP04085 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PDGFAP04085 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.43□□□□□ -0.1
PDGFAP04085 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFAP04085 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PDGFAP04085 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.43□□□□□ -0.1
PDGFAP04085 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.43□□□□□ -0.1
PDGFAP04085 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.43□□□□□ -0.1
PDGFAP04085 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.43□□□□□ -0.1
PDGFAP04085 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.43□□□□□ -0.1
PDGFAP04085 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.42□□□□□ -0.1
PDGFAP04085 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.42□□□□□ -0.1
PDGFAP04085 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
PDGFAP04085 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PDGFAP04085 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.42□□□□□ -0.1
PDGFAP04085 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 AC134407.2-201ENST00000625089 1978 ntBASIC14.42□□□□□ -0.1
PDGFAP04085 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 AL365209.1-201ENST00000624418 6473 ntBASIC14.42□□□□□ -0.1
PDGFAP04085 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PDGFAP04085 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 MIR326-201ENST00000362220 95 ntBASIC14.42□□□□□ -0.1
PDGFAP04085 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.42□□□□□ -0.1
PDGFAP04085 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.42□□□□□ -0.1
PDGFAP04085 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.42□□□□□ -0.1
PDGFAP04085 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PDGFAP04085 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 FAM86HP-204ENST00000513466 959 ntBASIC14.42□□□□□ -0.1
PDGFAP04085 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.42□□□□□ -0.1
PDGFAP04085 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.42□□□□□ -0.1
PDGFAP04085 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.42□□□□□ -0.1
PDGFAP04085 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.42□□□□□ -0.1
PDGFAP04085 AL118558.3-201ENST00000607414 1079 ntBASIC14.42□□□□□ -0.1
PDGFAP04085 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.42□□□□□ -0.1
PDGFAP04085 AC008687.7-202ENST00000637404 953 ntBASIC14.42□□□□□ -0.1
PDGFAP04085 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.42□□□□□ -0.1
PDGFAP04085 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PDGFAP04085 AC139749.1-202ENST00000617529 3139 ntBASIC14.42□□□□□ -0.1
PDGFAP04085 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PDGFAP04085 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.42□□□□□ -0.1
PDGFAP04085 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PDGFAP04085 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFAP04085 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms