Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.71■□□□□ 0.27
VTNP04004 AC026434.2-201ENST00000506094 1078 ntBASIC16.71■□□□□ 0.27
VTNP04004 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
VTNP04004 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.71■□□□□ 0.27
VTNP04004 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.71■□□□□ 0.27
VTNP04004 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.71■□□□□ 0.27
VTNP04004 MIR3615-201ENST00000581999 87 ntBASIC16.71■□□□□ 0.27
VTNP04004 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.71■□□□□ 0.27
VTNP04004 AC073413.1-201ENST00000603927 732 ntBASIC16.71■□□□□ 0.27
VTNP04004 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.71■□□□□ 0.27
VTNP04004 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
VTNP04004 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.71■□□□□ 0.27
VTNP04004 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 AL137783.1-201ENST00000623494 1896 ntBASIC16.71■□□□□ 0.27
VTNP04004 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
VTNP04004 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.71■□□□□ 0.26
VTNP04004 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
VTNP04004 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
VTNP04004 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.7■□□□□ 0.26
VTNP04004 CLUHP2-201ENST00000426660 1303 ntBASIC16.7■□□□□ 0.26
VTNP04004 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
VTNP04004 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.7■□□□□ 0.26
VTNP04004 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.7■□□□□ 0.26
VTNP04004 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
VTNP04004 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
VTNP04004 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
VTNP04004 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.7■□□□□ 0.26
VTNP04004 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 AC006033.1-201ENST00000440505 426 ntBASIC16.7■□□□□ 0.26
VTNP04004 PPY2P-201ENST00000582808 702 ntBASIC16.7■□□□□ 0.26
VTNP04004 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
VTNP04004 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.7■□□□□ 0.26
VTNP04004 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
VTNP04004 AL096828.3-201ENST00000615354 462 ntBASIC16.7■□□□□ 0.26
VTNP04004 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.7■□□□□ 0.26
VTNP04004 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
VTNP04004 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.7■□□□□ 0.26
VTNP04004 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
VTNP04004 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.7■□□□□ 0.26
VTNP04004 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.7■□□□□ 0.26
VTNP04004 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VTNP04004 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
VTNP04004 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 C18orf15-201ENST00000623680 2534 ntBASIC16.69■□□□□ 0.26
VTNP04004 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
VTNP04004 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 KRT8P4-201ENST00000509735 1454 ntBASIC16.69■□□□□ 0.26
VTNP04004 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.69■□□□□ 0.26
VTNP04004 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.69■□□□□ 0.26
VTNP04004 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
VTNP04004 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 GPAA1P2-201ENST00000417923 928 ntBASIC16.69■□□□□ 0.26
VTNP04004 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.69■□□□□ 0.26
VTNP04004 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.69■□□□□ 0.26
VTNP04004 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
VTNP04004 AC106820.3-201ENST00000561653 397 ntBASIC16.69■□□□□ 0.26
VTNP04004 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.69■□□□□ 0.26
VTNP04004 AC104982.3-201ENST00000581995 514 ntBASIC16.69■□□□□ 0.26
VTNP04004 RN7SL713P-201ENST00000582127 302 ntBASIC16.69■□□□□ 0.26
VTNP04004 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.69■□□□□ 0.26
VTNP04004 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.69■□□□□ 0.26
VTNP04004 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.69■□□□□ 0.26
VTNP04004 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
VTNP04004 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 AC112693.3-201ENST00000624819 1983 ntBASIC16.69■□□□□ 0.26
VTNP04004 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VTNP04004 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms