Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.2■□□□□ 0.34
ALDH1A1P00352 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.2■□□□□ 0.34
ALDH1A1P00352 AREG-202ENST00000502307 956 ntTSL 5 BASIC17.2■□□□□ 0.34
ALDH1A1P00352 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.2■□□□□ 0.34
ALDH1A1P00352 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.2■□□□□ 0.34
ALDH1A1P00352 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.2■□□□□ 0.34
ALDH1A1P00352 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.2■□□□□ 0.34
ALDH1A1P00352 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 AC090502.4-201ENST00000551714 1386 ntBASIC17.19■□□□□ 0.34
ALDH1A1P00352 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 NDUFS6P1-201ENST00000485187 316 ntBASIC17.19■□□□□ 0.34
ALDH1A1P00352 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.19■□□□□ 0.34
ALDH1A1P00352 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ALDH1A1P00352 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 BANF1P3-201ENST00000412556 261 ntBASIC17.18■□□□□ 0.34
ALDH1A1P00352 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 AL807761.2-201ENST00000422849 729 ntBASIC17.18■□□□□ 0.34
ALDH1A1P00352 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 AC024293.1-201ENST00000467930 498 ntBASIC17.18■□□□□ 0.34
ALDH1A1P00352 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 MIR4522-201ENST00000584932 87 ntBASIC17.18■□□□□ 0.34
ALDH1A1P00352 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 AC138466.5-201ENST00000624002 808 ntBASIC17.18■□□□□ 0.34
ALDH1A1P00352 AC073911.3-201ENST00000624401 631 ntBASIC17.18■□□□□ 0.34
ALDH1A1P00352 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 AC020910.5-201ENST00000623668 1865 ntBASIC17.18■□□□□ 0.34
ALDH1A1P00352 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ALDH1A1P00352 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.18■□□□□ 0.34
ALDH1A1P00352 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms