Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CSPG5O95196 HINT2P1-201ENST00000419438 481 ntBASIC16.5■□□□□ 0.23
CSPG5O95196 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.5■□□□□ 0.23
CSPG5O95196 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.5■□□□□ 0.23
CSPG5O95196 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.5■□□□□ 0.23
CSPG5O95196 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.5■□□□□ 0.23
CSPG5O95196 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CSPG5O95196 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.5■□□□□ 0.23
CSPG5O95196 AC106872.11-201ENST00000605838 421 ntBASIC16.5■□□□□ 0.23
CSPG5O95196 MIR6727-201ENST00000620702 65 ntBASIC16.5■□□□□ 0.23
CSPG5O95196 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.5■□□□□ 0.23
CSPG5O95196 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CSPG5O95196 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CSPG5O95196 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSPG5O95196 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CSPG5O95196 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.49■□□□□ 0.23
CSPG5O95196 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CSPG5O95196 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 AL513477.1-201ENST00000602865 2407 ntBASIC16.49■□□□□ 0.23
CSPG5O95196 AC138028.6-201ENST00000616106 1482 ntBASIC16.49■□□□□ 0.23
CSPG5O95196 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.49■□□□□ 0.23
CSPG5O95196 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 TPM3P8-201ENST00000330554 643 ntBASIC16.49■□□□□ 0.23
CSPG5O95196 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 AL662890.1-201ENST00000396818 632 ntBASIC16.49■□□□□ 0.23
CSPG5O95196 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.49■□□□□ 0.23
CSPG5O95196 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
CSPG5O95196 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.49■□□□□ 0.23
CSPG5O95196 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.49■□□□□ 0.23
CSPG5O95196 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.49■□□□□ 0.23
CSPG5O95196 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.49■□□□□ 0.23
CSPG5O95196 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.49■□□□□ 0.23
CSPG5O95196 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.49■□□□□ 0.23
CSPG5O95196 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.49■□□□□ 0.23
CSPG5O95196 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.49■□□□□ 0.23
CSPG5O95196 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CSPG5O95196 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSPG5O95196 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CSPG5O95196 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.48■□□□□ 0.23
CSPG5O95196 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.48■□□□□ 0.23
CSPG5O95196 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CSPG5O95196 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.48■□□□□ 0.23
CSPG5O95196 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CSPG5O95196 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CSPG5O95196 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CSPG5O95196 KLF2P2-201ENST00000416807 1039 ntBASIC16.48■□□□□ 0.23
CSPG5O95196 NUS1P3-201ENST00000423502 862 ntBASIC16.48■□□□□ 0.23
CSPG5O95196 AC091804.1-201ENST00000486888 567 ntBASIC16.48■□□□□ 0.23
CSPG5O95196 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.48■□□□□ 0.23
CSPG5O95196 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.48■□□□□ 0.23
CSPG5O95196 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.48■□□□□ 0.23
CSPG5O95196 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.48■□□□□ 0.23
CSPG5O95196 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.48■□□□□ 0.23
CSPG5O95196 AC006453.4-201ENST00000636949 1252 ntBASIC16.48■□□□□ 0.23
CSPG5O95196 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
CSPG5O95196 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CSPG5O95196 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CSPG5O95196 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSPG5O95196 AC148477.4-201ENST00000613430 1793 ntBASIC16.48■□□□□ 0.23
CSPG5O95196 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms