Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC104457.1-201ENST00000401024 814 ntBASIC14.43□□□□□ -0.1
LDB3O75112 AL162726.2-201ENST00000438986 1017 ntBASIC14.43□□□□□ -0.1
LDB3O75112 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LDB3O75112 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.43□□□□□ -0.1
LDB3O75112 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.43□□□□□ -0.1
LDB3O75112 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.43□□□□□ -0.1
LDB3O75112 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.43□□□□□ -0.1
LDB3O75112 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LDB3O75112 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.43□□□□□ -0.1
LDB3O75112 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDB3O75112 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.43□□□□□ -0.1
LDB3O75112 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDB3O75112 AL158070.2-201ENST00000623713 1621 ntBASIC14.43□□□□□ -0.1
LDB3O75112 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.43□□□□□ -0.1
LDB3O75112 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LDB3O75112 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.43□□□□□ -0.1
LDB3O75112 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LDB3O75112 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LDB3O75112 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDB3O75112 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LDB3O75112 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.43□□□□□ -0.1
LDB3O75112 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LDB3O75112 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDB3O75112 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LDB3O75112 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.43□□□□□ -0.1
LDB3O75112 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 AC093525.8-201ENST00000624099 1342 ntBASIC14.42□□□□□ -0.1
LDB3O75112 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.42□□□□□ -0.1
LDB3O75112 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LDB3O75112 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
LDB3O75112 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 PCDHA3-202ENST00000532566 4594 ntBASIC14.42□□□□□ -0.1
LDB3O75112 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 AL157414.3-201ENST00000624276 1954 ntBASIC14.42□□□□□ -0.1
LDB3O75112 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 AGAP7P-201ENST00000582299 2062 ntBASIC14.42□□□□□ -0.1
LDB3O75112 AGAP14-201ENST00000624701 2060 ntBASIC14.42□□□□□ -0.1
LDB3O75112 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LDB3O75112 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LDB3O75112 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.42□□□□□ -0.1
LDB3O75112 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.42□□□□□ -0.1
LDB3O75112 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.42□□□□□ -0.1
LDB3O75112 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LDB3O75112 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.42□□□□□ -0.1
LDB3O75112 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LDB3O75112 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LDB3O75112 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.42□□□□□ -0.1
LDB3O75112 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.42□□□□□ -0.1
LDB3O75112 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.42□□□□□ -0.1
LDB3O75112 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 BX539320.1-201ENST00000623759 877 ntBASIC14.42□□□□□ -0.1
LDB3O75112 AC005252.2-201ENST00000624630 1141 ntBASIC14.42□□□□□ -0.1
LDB3O75112 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.42□□□□□ -0.1
LDB3O75112 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.42□□□□□ -0.1
LDB3O75112 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.42□□□□□ -0.1
LDB3O75112 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.42□□□□□ -0.1
LDB3O75112 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LDB3O75112 REXO1L2P-201ENST00000425429 2069 ntBASIC14.42□□□□□ -0.1
LDB3O75112 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms