Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 MST1L-201ENST00000442552 2185 ntBASIC13.73□□□□□ -0.21
CXCL13O43927 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CXCL13O43927 AC126365.1-201ENST00000578585 1514 ntBASIC13.73□□□□□ -0.21
CXCL13O43927 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CXCL13O43927 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCL13O43927 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CXCL13O43927 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
CXCL13O43927 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CXCL13O43927 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
CXCL13O43927 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCL13O43927 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.72□□□□□ -0.21
CXCL13O43927 AC138035.3-201ENST00000622706 2791 ntBASIC13.72□□□□□ -0.21
CXCL13O43927 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL13O43927 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CXCL13O43927 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL13O43927 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CXCL13O43927 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL13O43927 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL13O43927 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL13O43927 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.72□□□□□ -0.21
CXCL13O43927 AC104457.1-201ENST00000401024 814 ntBASIC13.72□□□□□ -0.21
CXCL13O43927 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL13O43927 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.72□□□□□ -0.21
CXCL13O43927 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 KLF2P2-201ENST00000416807 1039 ntBASIC13.72□□□□□ -0.21
CXCL13O43927 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.72□□□□□ -0.21
CXCL13O43927 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.72□□□□□ -0.21
CXCL13O43927 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.72□□□□□ -0.21
CXCL13O43927 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL13O43927 KRT17P8-201ENST00000540749 863 ntBASIC13.72□□□□□ -0.21
CXCL13O43927 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.72□□□□□ -0.21
CXCL13O43927 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL13O43927 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.72□□□□□ -0.21
CXCL13O43927 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.72□□□□□ -0.21
CXCL13O43927 AL022328.1-201ENST00000610050 478 ntBASIC13.72□□□□□ -0.21
CXCL13O43927 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.72□□□□□ -0.21
CXCL13O43927 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL13O43927 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.72□□□□□ -0.21
CXCL13O43927 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CXCL13O43927 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL13O43927 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL13O43927 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL13O43927 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.71□□□□□ -0.21
CXCL13O43927 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.71□□□□□ -0.21
CXCL13O43927 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CXCL13O43927 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.71□□□□□ -0.21
CXCL13O43927 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL13O43927 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.71□□□□□ -0.21
CXCL13O43927 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL13O43927 KRT8P35-201ENST00000483942 1338 ntBASIC13.71□□□□□ -0.21
CXCL13O43927 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.71□□□□□ -0.21
CXCL13O43927 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CXCL13O43927 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL13O43927 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL13O43927 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL13O43927 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.71□□□□□ -0.21
CXCL13O43927 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CXCL13O43927 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CXCL13O43927 AL645937.2-201ENST00000396808 931 ntBASIC13.71□□□□□ -0.21
CXCL13O43927 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.71□□□□□ -0.21
CXCL13O43927 AC112492.5-201ENST00000421897 457 ntBASIC13.71□□□□□ -0.21
CXCL13O43927 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL13O43927 KRT43P-201ENST00000434019 910 ntBASIC13.71□□□□□ -0.21
CXCL13O43927 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.71□□□□□ -0.21
CXCL13O43927 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.71□□□□□ -0.21
CXCL13O43927 GPR53P-205ENST00000457298 1084 ntBASIC13.71□□□□□ -0.21
CXCL13O43927 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms