Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
HDAC3O15379 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
HDAC3O15379 AL590627.1-203ENST00000421194 1026 ntBASIC14.97□□□□□ -0.01
HDAC3O15379 MCCD1P2-201ENST00000423228 335 ntBASIC14.97□□□□□ -0.01
HDAC3O15379 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC3O15379 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC3O15379 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC3O15379 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.97□□□□□ -0.01
HDAC3O15379 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
HDAC3O15379 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.97□□□□□ -0.01
HDAC3O15379 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC3O15379 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.97□□□□□ -0.01
HDAC3O15379 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.97□□□□□ -0.01
HDAC3O15379 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC3O15379 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.97□□□□□ -0.01
HDAC3O15379 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC3O15379 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HDAC3O15379 AC025181.2-201ENST00000606994 802 ntBASIC14.97□□□□□ -0.01
HDAC3O15379 AL133215.2-201ENST00000609242 977 ntBASIC14.97□□□□□ -0.01
HDAC3O15379 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
HDAC3O15379 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
HDAC3O15379 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC3O15379 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC3O15379 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
HDAC3O15379 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC3O15379 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.97□□□□□ -0.01
HDAC3O15379 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HDAC3O15379 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.96□□□□□ -0.01
HDAC3O15379 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 AC092135.3-201ENST00000624151 1846 ntBASIC14.96□□□□□ -0.01
HDAC3O15379 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.96□□□□□ -0.01
HDAC3O15379 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.96□□□□□ -0.01
HDAC3O15379 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.96□□□□□ -0.01
HDAC3O15379 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.96□□□□□ -0.01
HDAC3O15379 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.96□□□□□ -0.01
HDAC3O15379 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.96□□□□□ -0.01
HDAC3O15379 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.96□□□□□ -0.01
HDAC3O15379 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.96□□□□□ -0.01
HDAC3O15379 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HDAC3O15379 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HDAC3O15379 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.96□□□□□ -0.01
HDAC3O15379 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 AC152010.1-201ENST00000415779 2006 ntBASIC14.96□□□□□ -0.01
HDAC3O15379 TPM4P1-201ENST00000436100 807 ntBASIC14.96□□□□□ -0.01
HDAC3O15379 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.96□□□□□ -0.01
HDAC3O15379 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.96□□□□□ -0.01
HDAC3O15379 SLC25A1P1-201ENST00000528351 927 ntBASIC14.96□□□□□ -0.01
HDAC3O15379 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.96□□□□□ -0.01
HDAC3O15379 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.96□□□□□ -0.01
HDAC3O15379 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.96□□□□□ -0.01
HDAC3O15379 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
HDAC3O15379 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDAC3O15379 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
HDAC3O15379 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HDAC3O15379 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
HDAC3O15379 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
HDAC3O15379 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HDAC3O15379 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HDAC3O15379 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
HDAC3O15379 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HDAC3O15379 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.95□□□□□ -0.02
HDAC3O15379 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HDAC3O15379 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HDAC3O15379 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms