Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXN3O00409 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXN3O00409 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXN3O00409 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXN3O00409 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.42■□□□□ 0.22
FOXN3O00409 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXN3O00409 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.42■□□□□ 0.22
FOXN3O00409 AC107373.2-201ENST00000607735 490 ntBASIC16.42■□□□□ 0.22
FOXN3O00409 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXN3O00409 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXN3O00409 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
FOXN3O00409 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 AL138799.1-201ENST00000448213 1675 ntBASIC16.42■□□□□ 0.22
FOXN3O00409 REXO1L5P-201ENST00000622260 2098 ntBASIC16.42■□□□□ 0.22
FOXN3O00409 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXN3O00409 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXN3O00409 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
FOXN3O00409 AC093525.8-201ENST00000624099 1342 ntBASIC16.42■□□□□ 0.22
FOXN3O00409 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 AC018529.2-202ENST00000611482 3087 ntBASIC16.42■□□□□ 0.22
FOXN3O00409 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXN3O00409 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXN3O00409 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
FOXN3O00409 AC232323.1-201ENST00000540724 2099 ntBASIC16.41■□□□□ 0.22
FOXN3O00409 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
FOXN3O00409 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 MIR770-201ENST00000390219 98 ntBASIC16.41■□□□□ 0.22
FOXN3O00409 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.41■□□□□ 0.22
FOXN3O00409 MEP1AP4-201ENST00000423244 1087 ntBASIC16.41■□□□□ 0.22
FOXN3O00409 SPTLC1P1-201ENST00000447199 261 ntBASIC16.41■□□□□ 0.22
FOXN3O00409 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.41■□□□□ 0.22
FOXN3O00409 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.41■□□□□ 0.22
FOXN3O00409 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.41■□□□□ 0.22
FOXN3O00409 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.41■□□□□ 0.22
FOXN3O00409 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.41■□□□□ 0.22
FOXN3O00409 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.41■□□□□ 0.22
FOXN3O00409 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.41■□□□□ 0.22
FOXN3O00409 BRI3BPP1-201ENST00000594224 787 ntBASIC16.41■□□□□ 0.22
FOXN3O00409 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
FOXN3O00409 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.41■□□□□ 0.22
FOXN3O00409 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.41■□□□□ 0.22
FOXN3O00409 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
FOXN3O00409 AC023908.3-201ENST00000564211 3047 ntBASIC16.41■□□□□ 0.22
FOXN3O00409 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.41■□□□□ 0.22
FOXN3O00409 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.41■□□□□ 0.22
FOXN3O00409 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.41■□□□□ 0.22
FOXN3O00409 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXN3O00409 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXN3O00409 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
FOXN3O00409 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FOXN3O00409 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXN3O00409 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FOXN3O00409 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 SLC7A15P-201ENST00000424028 1363 ntBASIC16.4■□□□□ 0.22
FOXN3O00409 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
FOXN3O00409 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
FOXN3O00409 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXN3O00409 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
FOXN3O00409 AL353779.1-201ENST00000434793 351 ntBASIC16.4■□□□□ 0.22
FOXN3O00409 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 SERBP1P5-201ENST00000510079 1181 ntBASIC16.4■□□□□ 0.22
FOXN3O00409 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXN3O00409 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXN3O00409 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.4■□□□□ 0.22
FOXN3O00409 RRP7BP-205ENST00000566851 833 ntBASIC16.4■□□□□ 0.22
FOXN3O00409 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms