Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SBNO1A3KN83 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC20.4■□□□□ 0.86
SBNO1A3KN83 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 AL157414.3-201ENST00000624276 1954 ntBASIC20.4■□□□□ 0.86
SBNO1A3KN83 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20.4■□□□□ 0.86
SBNO1A3KN83 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SBNO1A3KN83 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SBNO1A3KN83 SERF2-209ENST00000409646 559 ntTSL 4 BASIC20.4■□□□□ 0.86
SBNO1A3KN83 RPS9P1-201ENST00000419943 583 ntBASIC20.4■□□□□ 0.86
SBNO1A3KN83 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20.4■□□□□ 0.86
SBNO1A3KN83 MIR4649-201ENST00000582839 64 ntBASIC20.4■□□□□ 0.86
SBNO1A3KN83 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.4■□□□□ 0.86
SBNO1A3KN83 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
SBNO1A3KN83 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SBNO1A3KN83 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SBNO1A3KN83 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SBNO1A3KN83 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
SBNO1A3KN83 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SBNO1A3KN83 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC20.39■□□□□ 0.85
SBNO1A3KN83 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SBNO1A3KN83 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SBNO1A3KN83 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC20.39■□□□□ 0.85
SBNO1A3KN83 AP002803.1-201ENST00000528836 498 ntBASIC20.39■□□□□ 0.85
SBNO1A3KN83 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC20.39■□□□□ 0.85
SBNO1A3KN83 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
SBNO1A3KN83 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC20.39■□□□□ 0.85
SBNO1A3KN83 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC20.39■□□□□ 0.85
SBNO1A3KN83 AC005962.1-201ENST00000584100 773 ntBASIC20.39■□□□□ 0.85
SBNO1A3KN83 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC20.39■□□□□ 0.85
SBNO1A3KN83 AC007718.1-201ENST00000621078 280 ntBASIC20.39■□□□□ 0.85
SBNO1A3KN83 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SBNO1A3KN83 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SBNO1A3KN83 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 AL391005.1-201ENST00000623953 2435 ntBASIC20.39■□□□□ 0.85
SBNO1A3KN83 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 CAP2P1-201ENST00000557743 1390 ntBASIC20.39■□□□□ 0.85
SBNO1A3KN83 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20.39■□□□□ 0.85
SBNO1A3KN83 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SBNO1A3KN83 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SBNO1A3KN83 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC20.38■□□□□ 0.85
SBNO1A3KN83 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SBNO1A3KN83 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SBNO1A3KN83 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SBNO1A3KN83 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SBNO1A3KN83 RPL7P35-201ENST00000446943 740 ntBASIC20.38■□□□□ 0.85
SBNO1A3KN83 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC20.38■□□□□ 0.85
SBNO1A3KN83 IGHV3-37-201ENST00000518544 340 ntBASIC20.38■□□□□ 0.85
SBNO1A3KN83 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SBNO1A3KN83 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SBNO1A3KN83 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC20.38■□□□□ 0.85
SBNO1A3KN83 AL109837.1-201ENST00000603272 613 ntBASIC20.38■□□□□ 0.85
SBNO1A3KN83 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SBNO1A3KN83 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SBNO1A3KN83 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SBNO1A3KN83 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC20.38■□□□□ 0.85
SBNO1A3KN83 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SBNO1A3KN83 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SBNO1A3KN83 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SBNO1A3KN83 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SBNO1A3KN83 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.38■□□□□ 0.85
SBNO1A3KN83 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SBNO1A3KN83 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SBNO1A3KN83 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SBNO1A3KN83 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.38■□□□□ 0.85
SBNO1A3KN83 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SBNO1A3KN83 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SBNO1A3KN83 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SBNO1A3KN83 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SBNO1A3KN83 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC20.37■□□□□ 0.85
SBNO1A3KN83 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SBNO1A3KN83 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC20.37■□□□□ 0.85
SBNO1A3KN83 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.37■□□□□ 0.85
SBNO1A3KN83 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC20.37■□□□□ 0.85
SBNO1A3KN83 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SBNO1A3KN83 TPM1-223ENST00000560445 485 ntTSL 3 BASIC20.37■□□□□ 0.85
SBNO1A3KN83 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SBNO1A3KN83 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms