Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
HFM1A2PYH4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC22.3■■□□□ 1.16
HFM1A2PYH4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC22.3■■□□□ 1.16
HFM1A2PYH4 KC6-205ENST00000599934 556 ntTSL 4 BASIC22.3■■□□□ 1.16
HFM1A2PYH4 BX088702.1-201ENST00000610784 235 ntBASIC22.3■■□□□ 1.16
HFM1A2PYH4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
HFM1A2PYH4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HFM1A2PYH4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HFM1A2PYH4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC22.29■■□□□ 1.16
HFM1A2PYH4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HFM1A2PYH4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC22.29■■□□□ 1.16
HFM1A2PYH4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HFM1A2PYH4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HFM1A2PYH4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HFM1A2PYH4 SALL4P5-201ENST00000419001 1760 ntBASIC22.29■■□□□ 1.16
HFM1A2PYH4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
HFM1A2PYH4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HFM1A2PYH4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC22.29■■□□□ 1.16
HFM1A2PYH4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC22.29■■□□□ 1.16
HFM1A2PYH4 POM121L10P-201ENST00000436994 1285 ntBASIC22.29■■□□□ 1.16
HFM1A2PYH4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HFM1A2PYH4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC22.29■■□□□ 1.16
HFM1A2PYH4 PFN1P12-201ENST00000455938 534 ntBASIC22.29■■□□□ 1.16
HFM1A2PYH4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC22.29■■□□□ 1.16
HFM1A2PYH4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC22.29■■□□□ 1.16
HFM1A2PYH4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC22.29■■□□□ 1.16
HFM1A2PYH4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC22.29■■□□□ 1.16
HFM1A2PYH4 SHC1P1-201ENST00000425230 1745 ntBASIC22.29■■□□□ 1.16
HFM1A2PYH4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HFM1A2PYH4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HFM1A2PYH4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
HFM1A2PYH4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HFM1A2PYH4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HFM1A2PYH4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 MIR1247-201ENST00000408206 136 ntBASIC22.28■■□□□ 1.16
HFM1A2PYH4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 AC103810.3-201ENST00000583567 96 ntBASIC22.28■■□□□ 1.16
HFM1A2PYH4 AC091271.1-201ENST00000611877 1162 ntBASIC22.28■■□□□ 1.16
HFM1A2PYH4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC22.28■■□□□ 1.16
HFM1A2PYH4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HFM1A2PYH4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HFM1A2PYH4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
HFM1A2PYH4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HFM1A2PYH4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HFM1A2PYH4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HFM1A2PYH4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 AL162426.1-201ENST00000624141 743 ntBASIC22.27■■□□□ 1.16
HFM1A2PYH4 AC068587.10-201ENST00000641210 219 ntBASIC22.27■■□□□ 1.16
HFM1A2PYH4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HFM1A2PYH4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HFM1A2PYH4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC22.27■■□□□ 1.16
HFM1A2PYH4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms