Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM129A0AVI4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
TMEM129A0AVI4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TMEM129A0AVI4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM129A0AVI4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM129A0AVI4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM129A0AVI4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM129A0AVI4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM129A0AVI4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TMEM129A0AVI4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM129A0AVI4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM129A0AVI4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TMEM129A0AVI4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 AL353705.2-201ENST00000428243 662 ntBASIC13.92□□□□□ -0.18
TMEM129A0AVI4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 RNA5SP421-201ENST00000516864 134 ntBASIC13.92□□□□□ -0.18
TMEM129A0AVI4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 AC105021.1-202ENST00000570572 669 ntBASIC13.92□□□□□ -0.18
TMEM129A0AVI4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 RN7SL828P-201ENST00000607615 303 ntBASIC13.92□□□□□ -0.18
TMEM129A0AVI4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 AL035456.1-201ENST00000456064 1369 ntBASIC13.92□□□□□ -0.18
TMEM129A0AVI4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM129A0AVI4 MTHFR-210ENST00000641407 2387 ntBASIC13.91□□□□□ -0.18
TMEM129A0AVI4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 AC117489.1-201ENST00000625169 3217 ntBASIC13.91□□□□□ -0.18
TMEM129A0AVI4 INTS4P1-203ENST00000641008 3683 ntBASIC13.91□□□□□ -0.18
TMEM129A0AVI4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 BASP1P1-201ENST00000430708 665 ntBASIC13.91□□□□□ -0.18
TMEM129A0AVI4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 AL139010.1-201ENST00000454878 894 ntBASIC13.91□□□□□ -0.18
TMEM129A0AVI4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.91□□□□□ -0.18
TMEM129A0AVI4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms