Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 HNRNPUP1-201ENST00000554987 333 ntBASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF103-CHMP3A0A140T963 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 AC023024.2-201ENST00000623561 1993 ntBASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 ALG1L8P-201ENST00000533887 760 ntBASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 MIR4469-201ENST00000583919 79 ntBASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 AL513210.1-201ENST00000629608 234 ntBASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 AC079781.5-202ENST00000641784 3743 ntBASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 AC140479.7-201ENST00000636301 2332 ntBASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
RNF103-CHMP3A0A140T963 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 AC041040.2-201ENST00000622926 2899 ntBASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF103-CHMP3A0A140T963 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms