Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 KRT8P44-201ENST00000441609 1350 ntBASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 AC074338.1-201ENST00000416825 156 ntBASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 AC092580.3-201ENST00000430932 139 ntBASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 AC241585.1-201ENST00000433527 519 ntBASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 LINC01115-203ENST00000606068 577 ntBASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 MST1L-201ENST00000442552 2185 ntBASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 KRT18P64-201ENST00000434946 1219 ntBASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.19□□□□□ -0.62
TRGV1A0A0A0MS02 KRT18P43-201ENST00000469825 1281 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms