Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 TUBBP5-203ENST00000508529 1334 ntBASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 MAGEA5-201ENST00000446757 942 ntBASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 AC138466.3-201ENST00000619983 221 ntBASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 AC100757.4-201ENST00000626934 759 ntBASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC187A0A096LP49 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC187A0A096LP49 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC187A0A096LP49 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.46□□□□□ -0.1
CCDC187A0A096LP49 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC187A0A096LP49 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC187A0A096LP49 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC187A0A096LP49 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CCDC187A0A096LP49 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CCDC187A0A096LP49 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC187A0A096LP49 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC187A0A096LP49 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC187A0A096LP49 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC187A0A096LP49 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CCDC187A0A096LP49 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 LINC02447-202ENST00000501888 2146 ntBASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 AC055811.4-201ENST00000624039 1754 ntBASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 FXNP2-201ENST00000411625 547 ntBASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 TMEM198B-204ENST00000484016 896 ntBASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 AC022217.1-201ENST00000521069 738 ntBASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC187A0A096LP49 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms