Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 AC117489.1-201ENST00000625169 3217 ntBASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 KRT8P44-201ENST00000441609 1350 ntBASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 AC244107.1-201ENST00000442033 332 ntBASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 AC061975.2-201ENST00000581722 295 ntBASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 AL132655.2-201ENST00000596276 594 ntBASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX49Q9Y6V7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 AC007541.1-201ENST00000570282 1469 ntBASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 API5-211ENST00000534695 560 ntTSL 5 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 AC135586.1-201ENST00000539323 574 ntBASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 AC010336.2-201ENST00000564226 506 ntBASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX49Q9Y6V7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.52■□□□□ 0.56
DDX49Q9Y6V7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms