Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1G3Q9Y6M4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1G3Q9Y6M4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1G3Q9Y6M4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CSNK1G3Q9Y6M4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CSNK1G3Q9Y6M4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CSNK1G3Q9Y6M4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.03■□□□□ -0
CSNK1G3Q9Y6M4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1G3Q9Y6M4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 TPM3P8-201ENST00000330554 643 ntBASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 MIR1247-201ENST00000408206 136 ntBASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 GPAA1P2-201ENST00000417923 928 ntBASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 AC006033.1-201ENST00000440505 426 ntBASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 GOLGA2P4-201ENST00000441462 777 ntBASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.02■□□□□ -0
CSNK1G3Q9Y6M4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1G3Q9Y6M4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 MIR326-201ENST00000362220 95 ntBASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 AL139094.1-201ENST00000405549 1188 ntBASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 MIR1202-201ENST00000408529 83 ntBASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 BTBD6P1-201ENST00000412176 1267 ntBASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 KRT8P13-201ENST00000463294 1010 ntBASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 AC243960.2-201ENST00000600996 747 ntBASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 AL606495.2-201ENST00000605867 535 ntBASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.01□□□□□ -0.01
CSNK1G3Q9Y6M4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms