Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 RPSAP15-201ENST00000448168 861 ntBASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 AC079112.1-201ENST00000454972 939 ntBASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 NEU3-207ENST00000534628 746 ntTSL 2 BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 MIR6858-201ENST00000620733 67 ntBASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 CYP51A1P3-201ENST00000400072 1428 ntBASIC22.49■■□□□ 1.19
CDC42BPBQ9Y5S2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 RPL7P35-201ENST00000446943 740 ntBASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 AC107464.3-201ENST00000609172 737 ntBASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 AC023024.2-201ENST00000623561 1993 ntBASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 AC103810.10-201ENST00000606504 343 ntBASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC22.48■■□□□ 1.19
CDC42BPBQ9Y5S2 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 AC090502.4-201ENST00000551714 1386 ntBASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC22.47■■□□□ 1.19
CDC42BPBQ9Y5S2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 AL807761.2-201ENST00000422849 729 ntBASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 AC105137.3-201ENST00000617588 984 ntBASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 AC127024.7-201ENST00000625101 200 ntBASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 IL9RP3-201ENST00000442856 1674 ntBASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPBQ9Y5S2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms