Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 AL353705.2-201ENST00000428243 662 ntBASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 FAM58CP-201ENST00000435741 640 ntBASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 AC106730.1-201ENST00000566722 1090 ntBASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 AC092902.6-201ENST00000641783 218 ntBASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 REXO1L4P-201ENST00000605109 1937 ntBASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
UBE2D4Q9Y2X8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 OS9-207ENST00000439210 1946 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 AP001267.2-201ENST00000532619 2086 ntBASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 C1R-201ENST00000535233 2211 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
UBE2D4Q9Y2X8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms