Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 AC127383.1-201ENST00000444697 1800 ntBASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 AC015922.1-201ENST00000421102 1152 ntBASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 TIMM17BP1-201ENST00000545713 516 ntBASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 AC092337.1-201ENST00000568699 1129 ntBASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAPPC4Q9Y296 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 AC004461.2-201ENST00000629517 803 ntBASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC4Q9Y296 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 AC138969.3-201ENST00000546612 1459 ntBASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 AC138932.2-201ENST00000548268 1459 ntBASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 AC126755.4-201ENST00000549796 1459 ntBASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms