Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 AC006033.1-201ENST00000440505 426 ntBASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 RN7SL560P-201ENST00000577943 264 ntBASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 AC243960.2-201ENST00000600996 747 ntBASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 AL049840.4-201ENST00000602422 811 ntBASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDZRN3Q9UPQ7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PDZRN3Q9UPQ7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.77■□□□□ 0.75
PDZRN3Q9UPQ7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDZRN3Q9UPQ7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDZRN3Q9UPQ7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
PDZRN3Q9UPQ7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDZRN3Q9UPQ7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 ACKR1-201ENST00000368121 1240 ntBASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 HNRNPUP1-201ENST00000554987 333 ntBASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.76■□□□□ 0.75
PDZRN3Q9UPQ7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDZRN3Q9UPQ7 KRT90P-201ENST00000549264 1064 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms