Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC20.36■□□□□ 0.85
NPC1L1Q9UHC9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPC1L1Q9UHC9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPC1L1Q9UHC9 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPC1L1Q9UHC9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
NPC1L1Q9UHC9 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPC1L1Q9UHC9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC20.36■□□□□ 0.85
NPC1L1Q9UHC9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.36■□□□□ 0.85
NPC1L1Q9UHC9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.36■□□□□ 0.85
NPC1L1Q9UHC9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPC1L1Q9UHC9 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPC1L1Q9UHC9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPC1L1Q9UHC9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 AC023310.1-201ENST00000554836 735 ntBASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 TNRC18P2-201ENST00000417666 2714 ntBASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPC1L1Q9UHC9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 BNIP3P42-201ENST00000454982 569 ntBASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 BNIP3P29-201ENST00000598302 571 ntBASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 AC011447.5-201ENST00000616168 564 ntBASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 AC144831.1-201ENST00000573312 2656 ntBASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 AC010141.1-201ENST00000411585 623 ntBASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 SALL4P5-201ENST00000419001 1760 ntBASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms