Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 AC025279.2-201ENST00000569730 653 ntBASIC14.45□□□□□ -0.1
CTSFQ9UBX1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 CICP11-201ENST00000434745 2827 ntBASIC14.45□□□□□ -0.1
CTSFQ9UBX1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.45□□□□□ -0.1
CTSFQ9UBX1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 HLA-V-201ENST00000429037 534 ntBASIC14.44□□□□□ -0.1
CTSFQ9UBX1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 AL033527.4-201ENST00000641026 673 ntBASIC14.44□□□□□ -0.1
CTSFQ9UBX1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.44□□□□□ -0.1
CTSFQ9UBX1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSFQ9UBX1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 AL138709.1-201ENST00000614840 1693 ntBASIC14.43□□□□□ -0.1
CTSFQ9UBX1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 ACTBP8-201ENST00000403258 1108 ntBASIC14.43□□□□□ -0.1
CTSFQ9UBX1 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 CSF2RBP1-201ENST00000447905 391 ntBASIC14.43□□□□□ -0.1
CTSFQ9UBX1 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 SAMD11P1-201ENST00000571429 661 ntBASIC14.43□□□□□ -0.1
CTSFQ9UBX1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.43□□□□□ -0.1
CTSFQ9UBX1 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms