Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIN7CQ9NUP9 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LIN7CQ9NUP9 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
LIN7CQ9NUP9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
LIN7CQ9NUP9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.83□□□□□ -0.35
LIN7CQ9NUP9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
LIN7CQ9NUP9 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
LIN7CQ9NUP9 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 AC140878.1-201ENST00000565277 250 ntBASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 AC051619.7-201ENST00000568314 623 ntBASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 AC011467.4-201ENST00000594891 528 ntBASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIN7CQ9NUP9 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIN7CQ9NUP9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms